RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 C2CD4AQ8NCU7 369 aaPredicted RBP13.18□□□□□ -0.3
LDB3-202ENST00000361373 BADQ92934 168 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 KLHDC7BQ96G42 594 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 GAL3ST4Q96RP7 486 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 FIZ1Q96SL8 496 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 HBEGFQ99075 208 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 GPATCH1Q9BRR8 931 aaKnown RBP13.18□□□□□ -0.3
LDB3-202ENST00000361373 ZCCHC3Q9NUD5 404 aaKnown RBP13.18□□□□□ -0.3
LDB3-202ENST00000361373 TEX28O15482 410 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 TIMP1P01033 207 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 HRH2P25021 359 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 CCKBRP32239 447 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 GRIA2P42262 883 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 SEMG2Q02383 582 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 HKDC1Q2TB90 917 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 KRT74Q7RTS7 529 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 KRT77Q7Z794 578 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 OR10T2Q8NGX3 314 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 S100ZQ8WXG8 99 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 TRIB3Q96RU7 358 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 KLHL25Q9H0H3 589 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 CMTM6Q9NX76 183 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 AQP12BA6NM10 295 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 CTSAP10619 480 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 RPS21P63220 83 aaKnown RBP13.18□□□□□ -0.3
LDB3-202ENST00000361373 ELAVL3Q14576 367 aaKnown RBP13.18□□□□□ -0.3
LDB3-202ENST00000361373 THOC6Q86W42 341 aaKnown RBP13.18□□□□□ -0.3
LDB3-202ENST00000361373 AQP12AQ8IXF9 295 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 STRA6Q9BX79 667 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 U3KQV3 271 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 OR5K4A6NMS3 321 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 ABLIM1O14639 778 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 BCKDKO14874 412 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 RPS9P46781 194 aaKnown RBP13.18□□□□□ -0.3
LDB3-202ENST00000361373 ATP12AP54707 1039 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 C14orf80Q86SX3 495 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 BTBD3Q9Y2F9 522 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 DGKBQ9Y6T7 804 aa13.18□□□□□ -0.3
LDB3-202ENST00000361373 B4DGG1 531 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 CHRNGP07510 517 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 ALOX5P09917 674 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 MLLT3P42568 568 aaPredicted RBP13.17□□□□□ -0.3
LDB3-202ENST00000361373 GRK6P43250 576 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 CCR10P46092 362 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 FAM91A1Q658Y4 838 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 PACS2Q86VP3 889 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 ZDHHC14Q8IZN3 488 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 FAM47BQ8NA70 645 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 CLEC4MQ9H2X3 399 aaPredicted RBP13.17□□□□□ -0.3
LDB3-202ENST00000361373 C8orf33Q9H7E9 229 aaPredicted RBP13.17□□□□□ -0.3
LDB3-202ENST00000361373 EHD3Q9NZN3 535 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 CAPN14A8MX76 684 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 PGRMC2O15173 223 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 COQ9O75208 318 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 IRF9Q00978 393 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 ITGADQ13349 1161 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 DCTN2Q13561 401 aaKnown RBP13.17□□□□□ -0.3
LDB3-202ENST00000361373 AGTRAPQ6RW13 159 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 KLHL24Q6TFL4 600 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 OR9A1PQ8NGU1 263 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 LRRC15Q8TF66 581 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 ATXN10Q9UBB4 475 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 CKLFQ9UBR5 152 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 CLCA3PQ9Y6N3 262 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 SLC16A5O15375 505 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 GJB5O95377 273 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 SEC24AO95486 1093 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 ALPPP05187 535 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 RAP2AP10114 183 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 CST5P28325 142 aaPredicted RBP13.17□□□□□ -0.3
LDB3-202ENST00000361373 NCBP2P52298 156 aaKnown RBP eCLIP13.17□□□□□ -0.3
LDB3-202ENST00000361373 WDR4P57081 412 aaKnown RBP13.17□□□□□ -0.3
LDB3-202ENST00000361373 MED22Q15528 200 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 B3GNT9Q6UX72 402 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 ANKRD46Q86W74 232 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 TMEM145Q8NBT3 493 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 GPR151Q8TDV0 419 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 RANBP9Q96S59 729 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 ACSS2Q9NR19 701 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 CDH7Q9ULB5 785 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 C2orf71A6NGG8 1288 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 DLX3O60479 287 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 SHMT2P34897 504 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 GSCP56915 257 aaPredicted RBP13.17□□□□□ -0.3
LDB3-202ENST00000361373 CCDC92Q53HC0 331 aaPredicted RBP13.17□□□□□ -0.3
LDB3-202ENST00000361373 SLC34A3Q8N130 599 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 TRAM1L1Q8N609 369 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 ZNF366Q8N895 744 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 RNASE11Q8TAA1 199 aaKnown RBP13.17□□□□□ -0.3
LDB3-202ENST00000361373 GALNT8Q9NY28 637 aa13.17□□□□□ -0.3
LDB3-202ENST00000361373 RSL24D1Q9UHA3 163 aaKnown RBP13.17□□□□□ -0.3
LDB3-202ENST00000361373 PTGESO14684 152 aa13.16□□□□□ -0.3
LDB3-202ENST00000361373 ERI3O43414 337 aaKnown RBP13.16□□□□□ -0.3
LDB3-202ENST00000361373 NME6O75414 186 aaPredicted RBP13.16□□□□□ -0.3
LDB3-202ENST00000361373 STC2O76061 302 aa13.16□□□□□ -0.3
LDB3-202ENST00000361373 AMZ1Q400G9 498 aa13.16□□□□□ -0.3
LDB3-202ENST00000361373 TMIGD1Q6UXZ0 262 aa13.16□□□□□ -0.3
LDB3-202ENST00000361373 ZNF527Q8NB42 609 aa13.16□□□□□ -0.3
LDB3-202ENST00000361373 NDC1Q9BTX1 674 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms