RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 MCATQ8IVS2 390 aaKnown RBP20.28■□□□□ 0.84
CD47-202ENST00000361309 SRRM1Q8IYB3 904 aaKnown RBP20.28■□□□□ 0.84
CD47-202ENST00000361309 DNAJB14Q8TBM8 379 aa20.28■□□□□ 0.84
CD47-202ENST00000361309 GRHL3Q8TE85 626 aa20.28■□□□□ 0.84
CD47-202ENST00000361309 FKBP10Q96AY3 582 aa20.28■□□□□ 0.84
CD47-202ENST00000361309 ALS2CR12Q96Q35 445 aa20.28■□□□□ 0.84
CD47-202ENST00000361309 OSGIN2Q9Y236 505 aa20.28■□□□□ 0.84
CD47-202ENST00000361309 A0A1B0GX78 115 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 E2F3O00716 465 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 KDM1AO60341 852 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 MSNP26038 577 aaKnown RBP20.27■□□□□ 0.84
CD47-202ENST00000361309 PTPN7P35236 360 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 ARSFP54793 590 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 CSE1LP55060 971 aaKnown RBP20.27■□□□□ 0.84
CD47-202ENST00000361309 PLOD1Q02809 727 aaPredicted RBP20.27■□□□□ 0.84
CD47-202ENST00000361309 TBX2Q13207 712 aaPredicted RBP20.27■□□□□ 0.84
CD47-202ENST00000361309 PARP6Q2NL67 630 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 AGAP7PQ5VUJ5 663 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 IGFL2Q6UWQ7 119 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 ARHGEF18Q6ZSZ5 1173 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 SLC34A3Q8N130 599 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.27■□□□□ 0.84
CD47-202ENST00000361309 AGAP4Q96P64 663 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 LRRC40Q9H9A6 602 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 IMPACTQ9P2X3 320 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 HS3ST3B1Q9Y662 390 aa20.27■□□□□ 0.84
CD47-202ENST00000361309 METTL18O95568 372 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 ALBP02768 609 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 OR56A5P0C7T3 313 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 PKLRP30613 574 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 FOXN2P32314 431 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 TSFMP43897 325 aaKnown RBP20.26■□□□□ 0.83
CD47-202ENST00000361309 PER3P56645 1201 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 CDC16Q13042 620 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 NKG7Q16617 165 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 IRAK1BP1Q5VVH5 260 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 KIRREL2Q6UWL6 708 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 SHISA6Q6ZSJ9 500 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 COX15Q7KZN9 410 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 PARP9Q8IXQ6 854 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 C2orf73Q8N5S3 287 aaPredicted RBP20.26■□□□□ 0.83
CD47-202ENST00000361309 LMNTD1Q8N9Z9 388 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 LINC01555Q8NAE3 123 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 CNDP1Q96KN2 507 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 SPSB2Q99619 263 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 WDR54Q9H977 334 aa20.26■□□□□ 0.83
CD47-202ENST00000361309 MROH6A6NGR9 719 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 DSCR3O14972 297 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 OR1I1O60431 355 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 TJP3O95049 919 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 ONECUT2O95948 504 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 PIM1P11309 404 aaPredicted RBP20.25■□□□□ 0.83
CD47-202ENST00000361309 PSMA3P25788 255 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 RAB28P51157 221 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 ZNF169Q14929 603 aaPredicted RBP20.25■□□□□ 0.83
CD47-202ENST00000361309 FAM71DQ8N9W8 422 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 DENND1AQ8TEH3 1009 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 COG1Q8WTW3 980 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 FAR1Q8WVX9 515 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 LHPPQ9H008 270 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 SLC26A1Q9H2B4 701 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 SOX17Q9H6I2 414 aaPredicted RBP20.25■□□□□ 0.83
CD47-202ENST00000361309 CUTCQ9NTM9 273 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 CIDEBQ9UHD4 219 aa20.25■□□□□ 0.83
CD47-202ENST00000361309 CCDC162PA2VCL2 907 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 EDN3P14138 238 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 MCM3P25205 808 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 GRIA3P42263 894 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 RWDD2BP57060 319 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 SPA17Q15506 151 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 TUBB8Q3ZCM7 444 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 CCDC38Q502W7 563 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 DNAJC21Q5F1R6 531 aaKnown RBP20.24■□□□□ 0.83
CD47-202ENST00000361309 FCRL6Q6DN72 434 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 TAX1BP1Q86VP1 789 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 TC2NQ8N9U0 490 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 MENTQ9BUN1 341 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 EPS8L2Q9H6S3 715 aa20.24■□□□□ 0.83
CD47-202ENST00000361309 MRM3Q9HC36 420 aaKnown RBP20.24■□□□□ 0.83
CD47-202ENST00000361309 LUC7LQ9NQ29 371 aaKnown RBP20.24■□□□□ 0.83
CD47-202ENST00000361309 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.24■□□□□ 0.83
CD47-202ENST00000361309 ZNF189O75820 626 aaPredicted RBP20.23■□□□□ 0.83
CD47-202ENST00000361309 CD9P21926 228 aa20.23■□□□□ 0.83
CD47-202ENST00000361309 CETN2P41208 172 aa20.23■□□□□ 0.83
CD47-202ENST00000361309 ZRSR2Q15696 482 aaKnown RBP20.23■□□□□ 0.83
CD47-202ENST00000361309 RBBP7Q16576 425 aa20.23■□□□□ 0.83
CD47-202ENST00000361309 B3GNTL1Q67FW5 361 aaPredicted RBP20.23■□□□□ 0.83
CD47-202ENST00000361309 FIGLAQ6QHK4 219 aa20.23■□□□□ 0.83
CD47-202ENST00000361309 VRK3Q8IV63 474 aa20.23■□□□□ 0.83
CD47-202ENST00000361309 SLC22A15Q8IZD6 547 aa20.23■□□□□ 0.83
CD47-202ENST00000361309 TAB3Q8N5C8 712 aaPredicted RBP20.23■□□□□ 0.83
CD47-202ENST00000361309 METTL27Q8N6F8 245 aaPredicted RBP20.23■□□□□ 0.83
CD47-202ENST00000361309 CFAP61Q8NHU2 1237 aa20.23■□□□□ 0.83
CD47-202ENST00000361309 ALG3Q92685 438 aa20.23■□□□□ 0.83
CD47-202ENST00000361309 MARVELD3Q96A59 401 aa20.23■□□□□ 0.83
CD47-202ENST00000361309 THOC3Q96J01 351 aaKnown RBP20.23■□□□□ 0.83
CD47-202ENST00000361309 IL17FQ96PD4 163 aa20.23■□□□□ 0.83
CD47-202ENST00000361309 CTSFQ9UBX1 484 aa20.23■□□□□ 0.83
CD47-202ENST00000361309 OTOGQ6ZRI0 2925 aa20.22■□□□□ 0.83
CD47-202ENST00000361309 ARHGAP10A1A4S6 786 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms