RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 EURLQ9NYK6 297 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 A0A1W2PPW3 197 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 EBLN1P0CF75 366 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 ACRP10323 421 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 IL7RP16871 459 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 PSMD8P48556 350 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 HNMTP50135 292 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 TRIM32Q13049 653 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 LAPTM4AQ15012 233 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 MYLK3Q32MK0 819 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 TNFAIP8L2Q6P589 184 aaPredicted RBP15.97■□□□□ 0.15
SCAF1-201ENST00000360565 NXPE1Q8N323 547 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 SLC43A3Q8NBI5 491 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 OR52L1Q8NGH7 329 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 PTPN18Q99952 460 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 TMEM175Q9BSA9 504 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 PTGFRNQ9P2B2 879 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 FDXRP22570 491 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 ARSFP54793 590 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 CARTPTQ16568 116 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 SYT16Q17RD7 645 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 RFTN2Q52LD8 501 aaPredicted RBP15.97■□□□□ 0.15
SCAF1-201ENST00000360565 OR2T5Q6IEZ7 315 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 FAM171BQ6P995 826 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 KIAA1324Q6UXG2 1013 aaKnown RBP15.97■□□□□ 0.15
SCAF1-201ENST00000360565 PRR23BQ6ZRT6 265 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 OR2T29Q8NH02 315 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 KHSRPQ92945 711 aaKnown RBP eCLIP15.97■□□□□ 0.15
SCAF1-201ENST00000360565 C12orf43Q96C57 262 aaKnown RBP15.97■□□□□ 0.15
SCAF1-201ENST00000360565 LRCH3Q96II8 777 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 SLC29A3Q9BZD2 475 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 ARHGAP39Q9C0H5 1083 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 KAT8Q9H7Z6 458 aaKnown RBP15.97■□□□□ 0.15
SCAF1-201ENST00000360565 PHPT1Q9NRX4 125 aaPredicted RBP15.97■□□□□ 0.15
SCAF1-201ENST00000360565 MRPS7Q9Y2R9 242 aaKnown RBP15.97■□□□□ 0.15
SCAF1-201ENST00000360565 DOCK2Q92608 1830 aa15.97■□□□□ 0.15
SCAF1-201ENST00000360565 CENPXA8MT69 81 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 ZNF99A8MXY4 864 aaPredicted RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 DFNA5O60443 496 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 OAZ2O95190 189 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 SNAP29O95721 258 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 CYP11A1P05108 521 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 ALDH3A2P51648 485 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 RPS6KA3P51812 740 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 XKR5Q6UX68 686 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 ARHGAP12Q8IWW6 846 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 CACTIN-AS1Q8N1I8 211 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 YTHDF1Q9BYJ9 559 aaKnown RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 CD244Q9BZW8 370 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 NDEL1Q9GZM8 345 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 RPF2Q9H7B2 306 aaKnown RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TBC1D3DA0A087WVF3 549 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TBC1D3IA0A087WXS9 549 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TBC1D3EA0A087X179 549 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TBC1D3KA0A087X1G2 549 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TBC1D3FA6NER0 549 aaPredicted RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TBC1D3LB9A6J9 549 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 LOC110117498-PIK3R3F6TDL0 507 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 PI15O43692 258 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 PGLSO95336 258 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TBC1D3HP0C7X1 549 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 PLA2G16P53816 162 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TAS2R41P59536 307 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 NFATC2Q13469 925 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 DCST1Q5T197 706 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TBC1D3GQ6DHY5 549 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TBC1D3CQ6IPX1 549 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 ATG14Q6ZNE5 492 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TBC1D3Q8IZP1 549 aaPredicted RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 BEND7Q8N7W2 519 aaPredicted RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 ST13P5Q8NFI4 369 aaPredicted RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 CAPSLQ8WWF8 208 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 MRPL48Q96GC5 212 aaKnown RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 IGSF5Q9NSI5 407 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 PTBP2Q9UKA9 531 aaKnown RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 ZNF780BQ9Y6R6 833 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 PSMD11O00231 422 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TFECO14948 347 aaPredicted RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 ATP1B2P14415 290 aaPredicted RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 TUBA4AP68366 448 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 ABHD18Q0P651 414 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 SLBPQ14493 270 aaKnown RBP eCLIP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 NPTX1Q15818 432 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 RTP2Q5QGT7 225 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 GPRC6AQ5T6X5 926 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 LRRC70Q7Z2Q7 622 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 CYB5D2Q8WUJ1 264 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 C3orf14Q9HBI5 128 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 AIG1Q9NVV5 245 aa15.96■□□□□ 0.15
SCAF1-201ENST00000360565 DUS2Q9NX74 493 aaKnown RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 ZNF282Q9UDV7 671 aaPredicted RBP15.96■□□□□ 0.15
SCAF1-201ENST00000360565 LAMB1P07942 1786 aa15.96■□□□□ 0.14
SCAF1-201ENST00000360565 TRBV23OR9-2A0A075B6M9 112 aa15.95■□□□□ 0.14
SCAF1-201ENST00000360565 A0A1W2PQ45 241 aaPredicted RBP15.95■□□□□ 0.14
SCAF1-201ENST00000360565 A0A1W2PQY0 241 aa15.95■□□□□ 0.14
SCAF1-201ENST00000360565 ZW10O43264 779 aa15.95■□□□□ 0.14
SCAF1-201ENST00000360565 OR1F1O43749 312 aa15.95■□□□□ 0.14
SCAF1-201ENST00000360565 BLOC1S3Q6QNY0 202 aa15.95■□□□□ 0.14
SCAF1-201ENST00000360565 OR10G6Q8NH81 332 aa15.95■□□□□ 0.14
SCAF1-201ENST00000360565 STON2Q8WXE9 905 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms