RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 KANK2Q63ZY3 851 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 CD300LFQ8TDQ1 290 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 MTFMTQ96DP5 389 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 SLC39A8Q9C0K1 460 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 HECW2Q9P2P5 1572 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 BUD23O43709 281 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 HCN1O60741 890 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 SNNO75324 88 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 HSD17B1P14061 328 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 EPCAMP16422 314 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 NCS1P62166 190 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 BTN1A1Q13410 526 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 VASH1Q7L8A9 365 aaPredicted RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 GLIS1Q8NBF1 620 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 TSSK6Q9BXA6 273 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 SMURF2Q9HAU4 748 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF304Q9HCX3 659 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 NUDT15Q9NV35 164 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 THG1LQ9NWX6 298 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 EEDO75530 441 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 RLN2P04090 185 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 UBA1P22314 1058 aaKnown RBP5.96□□□□□ -1.46
VPS13B-203ENST00000358544 INHBCP55103 352 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 PPP3R1P63098 170 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ERVK-8P63133 956 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 EFCAB12Q6NXP0 572 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 IFNL1Q8IU54 200 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 CPNE9Q8IYJ1 553 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 LGI4Q8N135 537 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF567Q8N184 647 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 TAS2R3Q9NYW6 316 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 OR12D3Q9UGF7 316 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 SLC27A5Q9Y2P5 690 aa5.96□□□□□ -1.46
VPS13B-203ENST00000358544 ANXA2P2A6NMY6 339 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 DYNC1LI2O43237 492 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ANXA2P07355 339 aaKnown RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 CDKN2CP42773 168 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 TBX4P57082 545 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 MTAPQ13126 283 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 SELPLGQ14242 412 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PDE12Q6L8Q7 609 aaKnown RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 CMTR2Q8IYT2 770 aaKnown RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 NETO2Q8NC67 525 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 IKZF4Q9H2S9 585 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 STUB1Q9UNE7 303 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 MEIS2O14770 477 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 DHRS4L1P0CG22 281 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 NDUFAF5Q5TEU4 345 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 SLC15A3Q8IY34 581 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 GJD3Q8N144 294 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 GDPD1Q8N9F7 314 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 RIT1Q92963 219 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 RANBP9Q96S59 729 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 GPR21Q99679 349 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 COPZ2Q9P299 210 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ACSL5Q9ULC5 683 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ANKHD1Q8IWZ3 2542 aaKnown RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ASMTP46597 345 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 MC2RQ01718 297 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 RAPSNQ13702 412 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF730Q6ZMV8 503 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 CREB3L2Q70SY1 520 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PTERQ96BW5 349 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 RIPOR3Q96MK2 946 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 CACNG6Q9BXT2 260 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ZFYVE1Q9HBF4 777 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PEX14O75381 377 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 UNGP13051 313 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 CPN2P22792 545 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 GRK5P34947 590 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 FNTBP49356 437 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PCLAFQ15004 111 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PPP1R3AQ16821 1122 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ZACNQ401N2 412 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 INTS6LQ5JSJ4 861 aaKnown RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 FBXO47Q5MNV8 452 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 C10orf62Q5T681 223 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 LGI2Q8N0V4 545 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ZBTB2Q8N680 514 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 SRRDQ9UH36 339 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ZDHHC2Q9UIJ5 367 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 PIEZO1Q92508 2521 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 C9IYK1 514 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 TRIM3O75382 744 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 RB1P06400 928 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 USP17L7P0C7H9 530 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 SPP2Q13103 211 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 TUSC3Q13454 348 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 STK11Q15831 433 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 RFTN2Q52LD8 501 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 UBAP2Q5T6F2 1119 aaKnown RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 RHBDF2Q6PJF5 856 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ZPBP2Q6X784 338 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 RPTNQ6XPR3 784 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 OAFQ86UD1 273 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF548Q8NEK5 533 aaPredicted RBP5.95□□□□□ -1.46
VPS13B-203ENST00000358544 CTRCQ99895 268 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 SPATA5L1Q9BVQ7 753 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 SLC29A3Q9BZD2 475 aa5.95□□□□□ -1.46
VPS13B-203ENST00000358544 TIMM22Q9Y584 194 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms