RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ERVK-6Q9BXR3 956 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 CLCA3PQ9Y6N3 262 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 NDUFS4O43181 175 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 SIX3O95343 332 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-202ENST00000355133 CLCNKAP51800 687 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 OC90Q02509 493 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-202ENST00000355133 PUM1Q14671 1186 aaKnown RBP eCLIP12.95□□□□□ -0.34
SCN8A-202ENST00000355133 AKAP14Q86UN6 197 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 GLB1L3Q8NCI6 653 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-202ENST00000355133 NPLOC4Q8TAT6 608 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 BORCS5Q969J3 196 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 FRMD6Q96NE9 622 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 TRPV5Q9NQA5 729 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 SNX7Q9UNH6 387 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 HS3ST4Q9Y661 456 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 WNT6Q9Y6F9 365 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 WRBO00258 174 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 ECI2O75521 394 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 MTHFD1P11586 935 aaKnown RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 CCL5P13501 91 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 PDHA2P29803 388 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 DEFB119Q8N690 84 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 C8orf48Q96LL4 319 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 EBF4Q9BQW3 602 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 CCM2Q9BSQ5 444 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 GTPBP2Q9BX10 602 aaKnown RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 ILVBLA1L0T0 632 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 FAM234BA2RU67 622 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 AIREO43918 545 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 REM1O75628 298 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 TNFP01375 233 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 GPR33Q49SQ1 333 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 PRAMEF14Q5SWL7 426 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 PRAMEF13Q5VWM6 474 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 CAND1Q86VP6 1230 aaKnown RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 COQ8BQ96D53 544 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 FAXDC2Q96IV6 333 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 HIST1H2AAQ96QV6 131 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 NODALQ96S42 347 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 OSBPL2Q9H1P3 480 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 RNF121Q9H920 327 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 ZCCHC3Q9NUD5 404 aaKnown RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 MAN2B2Q9Y2E5 1009 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 ELOA3DA6NLF2 546 aaPredicted RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 ANXA2P2A6NMY6 339 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 SHOX2O60902 331 aaPredicted RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 CLDN7O95471 211 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 ANXA2P07355 339 aaKnown RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 ACVR2AP27037 513 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 RPL10P27635 214 aaKnown RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 GPR68Q15743 365 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 CARTPTQ16568 116 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 SGCBQ16585 318 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 ELOA3BQ3SY89 546 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 NUDT13Q86X67 352 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 NIPA2Q8N8Q9 360 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 ELOA3Q8NG57 546 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 ZNF599Q96NL3 588 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 TMEM109Q9BVC6 243 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 A0A0X1KG70 313 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 ERI3O43414 337 aaKnown RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 MMP20O60882 483 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 CLCN4P51793 760 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 HSF2Q03933 536 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 PHF19Q5T6S3 580 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 FAM46DQ8NEK8 389 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 SLC22A18Q96BI1 424 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 SEZ6LQ9BYH1 1024 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 IFT46Q9NQC8 304 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 ZNF208O43345 1280 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 PGRP06401 933 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 FUT4P22083 530 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 HSD17B2P37059 387 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 HADHBP55084 474 aaKnown RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 BTN3A2P78410 334 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 TXNL4AP83876 142 aaKnown RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 TBC1D25Q3MII6 688 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 P2RY8Q86VZ1 359 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 STX12Q86Y82 276 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 CELF5Q8N6W0 485 aaKnown RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 HAVCR1Q96D42 359 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 CDKN2AIPNLQ96HQ2 116 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 MKKSQ9NPJ1 570 aaPredicted RBP12.94□□□□□ -0.34
SCN8A-202ENST00000355133 SLC2A6Q9UGQ3 507 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 TAC3Q9UHF0 121 aa12.94□□□□□ -0.34
SCN8A-202ENST00000355133 A0A1W2PRG6 482 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 KLK1P06870 262 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 IMPDH1P20839 514 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 NRG3P56975 720 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 RNF220Q5VTB9 566 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 TXNRD3NBQ6F5E7 133 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 RNF19BQ6ZMZ0 732 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 CMTM8Q8IZV2 173 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 CADM1Q9BY67 442 aaKnown RBP12.93□□□□□ -0.34
SCN8A-202ENST00000355133 TBL1XR1Q9BZK7 514 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 SMG9Q9H0W8 520 aaKnown RBP12.93□□□□□ -0.34
SCN8A-202ENST00000355133 TBC1D24Q9ULP9 559 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 COQ4Q9Y3A0 265 aa12.93□□□□□ -0.34
SCN8A-202ENST00000355133 PRORSD1PA6NEY8 169 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms