RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CPZQ66K79 652 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 RANBP10Q6VN20 620 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 ZNF605Q86T29 641 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 REPS2Q8NFH8 660 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 RHBDF1Q96CC6 855 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 AS3MTQ9HBK9 375 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 ATP13A2Q9NQ11 1180 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 ABCB8Q9NUT2 735 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 IMPAD1Q9NX62 359 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 CPA4Q9UI42 421 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 ABCG2Q9UNQ0 655 aa7.46□□□□□ -1.21
BRCA1-201ENST00000352993 H3BQ06 376 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 WNT10BO00744 389 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 MATN3O15232 486 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 EPN2O95208 641 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 PAPSS2O95340 614 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 PGK2P07205 417 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 WEE1P30291 646 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 CXCR4P61073 352 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 NFKB2Q00653 900 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 DSC2Q02487 901 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF267Q14586 743 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 SHQ1Q6PI26 577 aaKnown RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 KLHL17Q6TDP4 642 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 FAM83AQ86UY5 434 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 TSPYL5Q86VY4 417 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 CACTIN-AS1Q8N1I8 211 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 CRYBG2Q8N1P7 616 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 YIPF7Q8N8F6 280 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 GALNT6Q8NCL4 622 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 OR8J3Q8NGG0 315 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 GPR151Q8TDV0 419 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 PPP1R13LQ8WUF5 828 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 NTAN1Q96AB6 310 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 MTFMTQ96DP5 389 aaKnown RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 FRMD6Q96NE9 622 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 ATOH8Q96SQ7 321 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 SLC9A7Q96T83 725 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 NUSAP1Q9BXS6 441 aaKnown RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 GON7Q9BXV9 100 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 BRINP2Q9C0B6 783 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 SLC22A4Q9H015 551 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 TFB2MQ9H5Q4 396 aaKnown RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 DCAF13Q9NV06 445 aaKnown RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 TMEM39AQ9NV64 488 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 TAS2R16Q9NYV7 291 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 TAS2R13Q9NYV9 303 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 MUTYHQ9UIF7 546 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 TBC1D24Q9ULP9 559 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 CFL2Q9Y281 166 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 A0A0G2JMP0 313 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 BTN3A3O00478 584 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 ANKRD28O15084 1053 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 SLC7A4O43246 635 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 KERAO60938 352 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 SEC22BO75396 215 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 GUCA1CO95843 209 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 F9P00740 461 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 CHRM5P08912 532 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 ZFP36L2P47974 494 aaKnown RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 INPP1P49441 399 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 TAF6P49848 677 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 MFSD10Q14728 455 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 INO80DQ53TQ3 878 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 FAM205BPQ63HN1 556 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 GPSM1Q86YR5 675 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 FBXO16Q8IX29 292 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 DPP10Q8N608 796 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 KRTCAP2Q8N6L1 136 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 OR13C4Q8NGS5 318 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 CDC26Q8NHZ8 85 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 ISG20Q96AZ6 181 aaKnown RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 MTERF3Q96E29 417 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 EGLN2Q96KS0 407 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 RIPOR3Q96MK2 946 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 OR2A14Q96R47 310 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 GPR21Q99679 349 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 CCDC32Q9BV29 185 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 SP110Q9HB58 689 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 ABCB9Q9NP78 766 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 FKBP14Q9NWM8 211 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 C1orf109Q9NX04 203 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 UXTQ9UBK9 157 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-201ENST00000352993 OGDHLQ9ULD0 1010 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 POLHQ9Y253 713 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 ARL5AQ9Y689 179 aa7.46□□□□□ -1.22
BRCA1-201ENST00000352993 MN1Q10571 1320 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 IGKV6-21A0A0C4DH24 114 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 SMIM30A4D0T7 59 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 M0R129 80 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 TSPAN1O60635 241 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF780AO75290 641 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 OR7A10O76100 309 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 MYCP01106 439 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-201ENST00000352993 COL6A1P12109 1028 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 HCAR3P49019 387 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 CRISP3P54108 245 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 RAB25P57735 213 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 HMGCS1Q01581 520 aa7.45□□□□□ -1.22
BRCA1-201ENST00000352993 BNC1Q01954 994 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms