RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 LIN54Q6MZP7 749 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 RELL1Q8IUW5 271 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 C7orf61Q8IZ16 206 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 IPCEF1Q8WWN9 437 aaPredicted RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 TMBIM1Q969X1 311 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 PHF12Q96QT6 1004 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 SRMSQ9H3Y6 488 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 USP29Q9HBJ7 922 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 FNIP2Q9P278 1114 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 FZD4Q9ULV1 537 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 A0A0D9SEW6 157 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 ECDO95905 644 aaPredicted RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 FGF3P11487 239 aaPredicted RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 SDC2P34741 201 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 HNMTP50135 292 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 DPY19L1Q2PZI1 675 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 PLET1Q6UQ28 207 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 C2CD4AQ8NCU7 369 aaPredicted RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 OR2AP1Q8NGE2 309 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 OR10Q1Q8NGQ4 319 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 C11orf24Q96F05 449 aaPredicted RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 MRPS30Q9NP92 439 aaKnown RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 SLC45A1Q9Y2W3 748 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 LRP6O75581 1613 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 RGS20O76081 388 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 LAPTM4BQ86VI4 370 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 CMTM8Q8IZV2 173 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 TMEM130Q8N3G9 435 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 ZBED6CLQ96FA7 236 aaPredicted RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 C1orf21Q9H246 121 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 GALNT8Q9NY28 637 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 ZIM2Q9NZV7 527 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 MRTO4Q9UKD2 239 aaKnown RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 GATMP50440 423 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 NCBP2P52298 156 aaKnown RBP eCLIP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 NADK2Q4G0N4 442 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 C1orf52Q8N6N3 182 aaKnown RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 ATP6V1C2Q8NEY4 427 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 TEPSINQ96N21 525 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 KCNC2Q96PR1 638 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 FIZ1Q96SL8 496 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 CDADC1Q9BWV3 514 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 TBC1D17Q9HA65 648 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 FBRSL1Q9HCM7 1045 aaKnown RBP15.67■□□□□ 0.1
PTPN11-201ENST00000351677 TMLHEQ9NVH6 421 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 TMEM248Q9NWD8 314 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 ING3Q9NXR8 418 aa15.67■□□□□ 0.1
PTPN11-201ENST00000351677 HCN1O60741 890 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 G6PDP11413 515 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 BDKRB1P46663 353 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 STC1P52823 247 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 TLE2Q04725 743 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 FRG2Q64ET8 278 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 SNX33Q8WV41 574 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 RELTQ969Z4 430 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 ARMC5Q96C12 935 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 FRG2BQ96QU4 278 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 SLC35A5Q9BS91 424 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 HTATIP2Q9BUP3 242 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 PCBD2Q9H0N5 130 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 CFAP20Q9Y6A4 193 aaKnown RBP15.66■□□□□ 0.1
PTPN11-201ENST00000351677 ARHGEF33A8MVX0 844 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 KDELR3O43731 214 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 CCNKO75909 580 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 NDUFA9Q16795 377 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 ZNF347Q96SE7 839 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 EXO5Q9H790 373 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 KAT8Q9H7Z6 458 aaKnown RBP15.66■□□□□ 0.1
PTPN11-201ENST00000351677 NDRG2Q9UN36 371 aaKnown RBP15.66■□□□□ 0.1
PTPN11-201ENST00000351677 DHRS7Q9Y394 339 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 KDM3BQ7LBC6 1761 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 ERN1O75460 977 aaKnown RBP15.66■□□□□ 0.1
PTPN11-201ENST00000351677 ACP5P13686 325 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 ATP1B2P14415 290 aaPredicted RBP15.66■□□□□ 0.1
PTPN11-201ENST00000351677 DNAJB8Q8NHS0 232 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 ARNTL2Q8WYA1 636 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 C5orf34Q96MH7 638 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 NUP188Q5SRE5 1749 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 IL7RP16871 459 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 SLC10A2Q12908 348 aaPredicted RBP15.66■□□□□ 0.1
PTPN11-201ENST00000351677 RABL3Q5HYI8 236 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 MMAAQ8IVH4 418 aaKnown RBP15.66■□□□□ 0.1
PTPN11-201ENST00000351677 TXNDC5Q8NBS9 432 aaKnown RBP15.66■□□□□ 0.1
PTPN11-201ENST00000351677 MIPEPQ99797 713 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 C16orf70Q9BSU1 422 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 RBMX2Q9Y388 322 aaKnown RBP15.66■□□□□ 0.1
PTPN11-201ENST00000351677 ASB3Q9Y575 518 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 RBM47A0AV96 593 aaKnown RBP15.66■□□□□ 0.1
PTPN11-201ENST00000351677 CBX3Q13185 183 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 UBAP2Q5T6F2 1119 aaKnown RBP15.66■□□□□ 0.1
PTPN11-201ENST00000351677 OR10G2Q8NGC3 310 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 MOCOSQ96EN8 888 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 DERL2Q9GZP9 239 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 NECTIN3Q9NQS3 549 aa15.66■□□□□ 0.1
PTPN11-201ENST00000351677 MTMR11A4FU01 709 aa15.65■□□□□ 0.1
PTPN11-201ENST00000351677 CLDN25C9JDP6 229 aa15.65■□□□□ 0.1
PTPN11-201ENST00000351677 MATN2O00339 956 aa15.65■□□□□ 0.1
PTPN11-201ENST00000351677 CPN2P22792 545 aa15.65■□□□□ 0.1
PTPN11-201ENST00000351677 CCNFP41002 786 aa15.65■□□□□ 0.1
PTPN11-201ENST00000351677 CLCN4P51793 760 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms