RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 CLDN9O95484 217 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 NTRK1P04629 796 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 MYCLP1P12525 358 aaPredicted RBP13.55□□□□□ -0.24
TRIM4-201ENST00000349062 TIMP2P16035 220 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 CAMK1Q14012 370 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 ZFP1Q6P2D0 407 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 XKR5Q6UX68 686 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 MCOLN3Q8TDD5 553 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 LIMD1Q9UGP4 676 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 EBF1Q9UH73 591 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 OARD1Q9Y530 152 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 TRANK1O15050 2925 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 PLOD2O00469 737 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 SOCS2O14508 198 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 EFCAB14O75071 495 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 LATS1O95835 1130 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 STATHP02808 62 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 GNPDA1P46926 289 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 CREMQ03060 361 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 GPR33Q49SQ1 333 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 C16orf87Q6PH81 154 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 CHST15Q7LFX5 561 aaPredicted RBP13.55□□□□□ -0.24
TRIM4-201ENST00000349062 RMND5BQ96G75 393 aaPredicted RBP13.55□□□□□ -0.24
TRIM4-201ENST00000349062 HPS4Q9NQG7 708 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 VAPAQ9P0L0 249 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 SUCOQ9UBS9 1254 aaKnown RBP13.55□□□□□ -0.24
TRIM4-201ENST00000349062 PTBP2Q9UKA9 531 aaKnown RBP13.55□□□□□ -0.24
TRIM4-201ENST00000349062 PAIP2BQ9ULR5 123 aaKnown RBP13.55□□□□□ -0.24
TRIM4-201ENST00000349062 OAZ3Q9UMX2 235 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 IFRD1O00458 451 aaPredicted RBP13.55□□□□□ -0.24
TRIM4-201ENST00000349062 GNGT2O14610 69 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 LSM1O15116 133 aaKnown RBP13.55□□□□□ -0.24
TRIM4-201ENST00000349062 PCDH8O95206 1070 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 CYP17A1P05093 508 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 EPHX1P07099 455 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 ACADVLP49748 655 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 SEC13P55735 322 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 INPP5AQ14642 412 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 LAPTM4AQ15012 233 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 PLCL1Q15111 1095 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 IER5LQ5T953 404 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 CACHD1Q5VU97 1274 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 GLYATQ6IB77 296 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 SULT1C3Q6IMI6 304 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 NEK5Q6P3R8 708 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 SPATA19Q7Z5L4 167 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 AHI1Q8N157 1196 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 CATSPER1Q8NEC5 780 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 MYRFQ9Y2G1 1151 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 CEPT1Q9Y6K0 416 aa13.55□□□□□ -0.24
TRIM4-201ENST00000349062 MANBAO00462 879 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 PSMD8P48556 350 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 GPM6BQ13491 265 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 ZXDCQ2QGD7 858 aaPredicted RBP13.54□□□□□ -0.24
TRIM4-201ENST00000349062 TTC33Q6PID6 262 aaPredicted RBP13.54□□□□□ -0.24
TRIM4-201ENST00000349062 PARS2Q7L3T8 475 aaKnown RBP13.54□□□□□ -0.24
TRIM4-201ENST00000349062 ADCY4Q8NFM4 1077 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 APIPQ96GX9 242 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 DGKBQ9Y6T7 804 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 COL4A4P53420 1690 aaPredicted RBP13.54□□□□□ -0.24
TRIM4-201ENST00000349062 KRT6AP02538 564 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 KRT6BP04259 564 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 LINC00271P0C7V0 271 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 EEF1B2P24534 225 aaKnown RBP13.54□□□□□ -0.24
TRIM4-201ENST00000349062 VARSP26640 1264 aaKnown RBP13.54□□□□□ -0.24
TRIM4-201ENST00000349062 GPR1P46091 355 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 KRT6CP48668 564 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 MPP7Q5T2T1 576 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 GPR107Q5VW38 600 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 HMBOX1Q6NT76 420 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 EFL1Q7Z2Z2 1120 aaKnown RBP13.54□□□□□ -0.24
TRIM4-201ENST00000349062 PATL1Q86TB9 770 aaKnown RBP13.54□□□□□ -0.24
TRIM4-201ENST00000349062 IL17FQ96PD4 163 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 DYRK4Q9NR20 520 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 DEC1Q9P2X7 70 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 PNMA8BQ9ULN7 279 aaPredicted RBP13.54□□□□□ -0.24
TRIM4-201ENST00000349062 CDC14AQ9UNH5 594 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 GFRA2O00451 464 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 GNAO1P09471 354 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 AQP1P29972 269 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 HNF4AP41235 474 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 TMEM125Q96AQ2 219 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 NSMCE2Q96MF7 247 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 MRPL40Q9NQ50 206 aaKnown RBP13.54□□□□□ -0.24
TRIM4-201ENST00000349062 CD300AQ9UGN4 299 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 DOCK9Q9BZ29 2069 aa13.54□□□□□ -0.24
TRIM4-201ENST00000349062 PRSS51A0A1B0GVH4 220 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 VPS4BO75351 444 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 CYP2A6P11509 494 aaPredicted RBP13.53□□□□□ -0.24
TRIM4-201ENST00000349062 SOX9P48436 509 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 RCAN2Q14206 197 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 NEDD8Q15843 81 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 MACC1Q6ZN28 852 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 CYP2U1Q7Z449 544 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 GPR141Q7Z602 305 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 TMPRSS11BQ86T26 416 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 RASGEF1AQ8N9B8 481 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 FAM162AQ96A26 154 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 ROPN1LQ96C74 230 aa13.53□□□□□ -0.24
TRIM4-201ENST00000349062 HOPXQ9BPY8 73 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms