RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 GRM2Q14416 872 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 DCAF4L2Q8NA75 395 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 EFCAB11Q9BUY7 163 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 KNDC1Q76NI1 1749 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 A0A0J9YVX5 310 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 STATHP02808 62 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 BTN2A1Q7KYR7 527 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 PEG10Q86TG7 708 aaKnown RBP18.22■□□□□ 0.51
UBE3C-201ENST00000348165 CCM2Q9BSQ5 444 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 AKTIPQ9H8T0 292 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 FAM92AA1XBS5 289 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 NME6O75414 186 aaPredicted RBP18.22■□□□□ 0.51
UBE3C-201ENST00000348165 BEST1O76090 585 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 RB1P06400 928 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 CCR8P51685 355 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 TUBA4AP68366 448 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 PRAMEF14Q5SWL7 426 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 PRAMEF13Q5VWM6 474 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 SLC32A1Q9H598 525 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 MYH2Q9UKX2 1941 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 EDDM13A0A1B0GTR0 161 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 FAM234BA2RU67 622 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 RGS10O43665 173 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 HNMTP50135 292 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 APLP1P51693 650 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 GHRHRQ02643 423 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 JSRP1Q96MG2 331 aaPredicted RBP18.22■□□□□ 0.51
UBE3C-201ENST00000348165 OR52B2Q96RD2 323 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 PAAF1Q9BRP4 392 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 RAB11FIP5Q9BXF6 653 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 TMEM138Q9NPI0 162 aa18.22■□□□□ 0.51
UBE3C-201ENST00000348165 BTN3A3O00478 584 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 PIK3R6Q5UE93 754 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 RASSF5Q8WWW0 418 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 YIPF4Q9BSR8 244 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 WDR12Q9GZL7 423 aaKnown RBP18.21■□□□□ 0.51
UBE3C-201ENST00000348165 TMEM248Q9NWD8 314 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 CALML5Q9NZT1 146 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 CLEC4AQ9UMR7 237 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 PRAMEF11O60813 436 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 GSCP56915 257 aaPredicted RBP18.21■□□□□ 0.51
UBE3C-201ENST00000348165 IFI44LQ53G44 452 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 NALCNQ8IZF0 1738 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 C10orf82Q8WW14 230 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 TFGQ92734 400 aaPredicted RBP18.21■□□□□ 0.51
UBE3C-201ENST00000348165 BORCS6Q96GS4 357 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 TAC3Q9UHF0 121 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 PRELID1Q9Y255 219 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 KCNK6Q9Y257 313 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 OAS3Q9Y6K5 1087 aaKnown RBP18.21■□□□□ 0.51
UBE3C-201ENST00000348165 RGPD8O14715 1765 aaPredicted RBP18.21■□□□□ 0.51
UBE3C-201ENST00000348165 COCHO43405 550 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 TULP3O75386 442 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 NCBP2P52298 156 aaKnown RBP eCLIP18.21■□□□□ 0.517e-8■■■■■ 30
UBE3C-201ENST00000348165 OLR1P78380 273 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 SLC8B1Q6J4K2 584 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 CITED4Q96RK1 184 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 USP29Q9HBJ7 922 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 TMEM59LQ9UK28 342 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 WASF2Q9Y6W5 498 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 FAM72CH0Y354 149 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 ALPPL2P10696 532 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 TRAP1Q12931 704 aaKnown RBP18.21■□□□□ 0.51
UBE3C-201ENST00000348165 FAM72AQ5TYM5 149 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 FRG2Q64ET8 278 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 FAM72DQ6L9T8 149 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 IKBIPQ70UQ0 350 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 FAM72BQ86X60 149 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 ZNF433Q8N7K0 673 aaPredicted RBP18.21■□□□□ 0.51
UBE3C-201ENST00000348165 SMG8Q8ND04 991 aaKnown RBP18.21■□□□□ 0.51
UBE3C-201ENST00000348165 SLC22A18Q96BI1 424 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 FRG2BQ96QU4 278 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 DPYSL5Q9BPU6 564 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 KIFC1Q9BW19 673 aa18.21■□□□□ 0.51
UBE3C-201ENST00000348165 ZNF282Q9UDV7 671 aaPredicted RBP18.21■□□□□ 0.51
UBE3C-201ENST00000348165 PRRC2BQ5JSZ5 2229 aaKnown RBP18.21■□□□□ 0.51
UBE3C-201ENST00000348165 CPED1A4D0V7 1026 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 ERI3O43414 337 aaKnown RBP18.2■□□□□ 0.5
UBE3C-201ENST00000348165 HOXB2P14652 356 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 BDKRB1P46663 353 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 AP1S2P56377 157 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 PDE12Q6L8Q7 609 aaKnown RBP18.2■□□□□ 0.5
UBE3C-201ENST00000348165 SMARCD3Q6STE5 483 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 Q6ZVL8 140 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 C1orf52Q8N6N3 182 aaKnown RBP18.2■□□□□ 0.5
UBE3C-201ENST00000348165 TMEM98Q9Y2Y6 226 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 ECDO95905 644 aaPredicted RBP18.2■□□□□ 0.5
UBE3C-201ENST00000348165 MTHFD1P11586 935 aaKnown RBP18.2■□□□□ 0.5
UBE3C-201ENST00000348165 VARSP26640 1264 aaKnown RBP18.2■□□□□ 0.5
UBE3C-201ENST00000348165 DHPSP49366 369 aaPredicted RBP18.2■□□□□ 0.5
UBE3C-201ENST00000348165 DPY19L1Q2PZI1 675 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 TMPRSS11AQ6ZMR5 421 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 MCEMP1Q8IX19 187 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 MCFD2Q8NI22 146 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 PIGXQ8TBF5 258 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 ARMC5Q96C12 935 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 BTBD1Q9H0C5 482 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 RNF186Q9NXI6 227 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 ALKBH4Q9NXW9 302 aa18.2■□□□□ 0.5
UBE3C-201ENST00000348165 COPS7AQ9UBW8 275 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms