RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 SNX24Q9Y343 169 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 DHRS7Q9Y394 339 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 AP1M2Q9Y6Q5 423 aa15.23■□□□□ 0.03
TSPAN4-201ENST00000346501 EIF3FO00303 357 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 ZBTB14O43829 449 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 HAUS5O94927 633 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 MATN4O95460 622 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 TUBB4AP04350 444 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 MPC1LP0DKB6 136 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 AGXTP21549 392 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 OAS2P29728 719 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 BDKRB1P46663 353 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 ILF2Q12905 390 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 ACSBG2Q5FVE4 666 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 ZNF789Q5FWF6 425 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 ZC3H12BQ5HYM0 836 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 TRIM73Q86UV7 250 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 AGGF1Q8N302 714 aaeCLIP15.22■□□□□ 0.031e-7■■■■□ 23.7
TSPAN4-201ENST00000346501 OR9A1PQ8NGU1 263 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 DENND1AQ8TEH3 1009 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 STARD8Q92502 1023 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 MR1Q95460 341 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 C16orf45Q96MC5 204 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 GPR21Q99679 349 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 ERP44Q9BS26 406 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 AARSD1Q9BTE6 412 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 FAM117AQ9C073 453 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 CHRNA10Q9GZZ6 450 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 ACTR5Q9H9F9 607 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 NSMCE4AQ9NXX6 385 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 SPHK1Q9NYA1 384 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 UTP6Q9NYH9 597 aaKnown RBP15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 WHRNQ9P202 907 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 ZFATQ9P243 1243 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 CROTQ9UKG9 612 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 CORO1CQ9ULV4 474 aaPredicted RBP15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 PLCL2Q9UPR0 1127 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 NFS1Q9Y697 457 aa15.22■□□□□ 0.03
TSPAN4-201ENST00000346501 ZZEF1O43149 2961 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 ZFYVE26Q68DK2 2539 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 BANF1O75531 89 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 OR2B3O76000 313 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 URI1O94763 535 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 RPL21P46778 160 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 CLCN7P51798 805 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 MPP1Q00013 466 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 CAV1Q03135 178 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 C2orf54Q08AI8 447 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 DNASE1L3Q13609 305 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 TSTA3Q13630 321 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 GBX1Q14549 363 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 ARHGAP19Q14CB8 494 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 MSS51Q4VC12 460 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 SOWAHCQ53LP3 525 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 HP1BP3Q5SSJ5 553 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 C16orf46Q6P387 395 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 CDHR3Q6ZTQ4 885 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 GALNT7Q86SF2 657 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 TAX1BP1Q86VP1 789 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 C2orf73Q8N5S3 287 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 PYROXD1Q8WU10 500 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 ZUFSPQ96AP4 578 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 LRFN5Q96NI6 719 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 IL17FQ96PD4 163 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 C17orf62Q9BQA9 187 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 DPH2Q9BQC3 489 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 SLC12A9Q9BXP2 914 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 GPR87Q9BY21 358 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 DPH5Q9H2P9 285 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 TXLNGQ9NUQ3 528 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 CIDEBQ9UHD4 219 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 RUVBL2Q9Y230 463 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 TEX264Q9Y6I9 313 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 CACNA1GO43497 2377 aa15.21■□□□□ 0.03
TSPAN4-201ENST00000346501 C9J4A7 227 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 KIF2AO00139 706 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 EIF3HO15372 352 aaKnown RBP eCLIP15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 PSIP1O75475 530 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 CCNDBP1O95273 360 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 TIAF1O95411 115 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 SYF2O95926 243 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 TPBGLP0DKB5 382 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 PRKAR1AP10644 381 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 CMPK1P30085 196 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 RPA3P35244 121 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 MGAT5Q09328 741 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 PDAP1Q13442 181 aaKnown RBP15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 CRTC2Q53ET0 693 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 TLDC1Q6P9B6 456 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 BORAQ6PGQ7 559 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 ANKMY2Q8IV38 441 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 CNTN4Q8IWV2 1026 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 ZBED8Q8IZ13 594 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 MYO1HQ8N1T3 1032 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 FBXO36Q8NEA4 188 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 OR1L3Q8NH93 324 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 HMGCLL1Q8TB92 370 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 MCOLN3Q8TDD5 553 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 SMPDL3AQ92484 453 aa15.2■□□□□ 0.02
TSPAN4-201ENST00000346501 ZNF592Q92610 1267 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms