RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 SP140Q13342 867 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 TECRLQ5HYJ1 363 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 TMEM207Q6UWW9 146 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 ISCA2Q86U28 154 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLDN18-202ENST00000343735 CPNE9Q8IYJ1 553 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 SDR16C5Q8N3Y7 309 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 OR2L2Q8NH16 312 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 HM13Q8TCT9 377 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 GLMNQ92990 594 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 TPSD1Q9BZJ3 242 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 SIRPGQ9P1W8 387 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 ZNHIT2Q9UHR6 403 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 RNF112Q9ULX5 631 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 PCDHGB4Q9UN71 923 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 PCDHGB5Q9Y5G0 923 aa9.53□□□□□ -0.88
CLDN18-202ENST00000343735 GRID2O43424 1007 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 LAMTOR5O43504 91 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 PRDX3P30048 256 aaKnown RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 CCR7P32248 378 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 THOP1P52888 689 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 NFATC4Q14934 902 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 CDKL4Q5MAI5 379 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 DUS1LQ6P1R4 473 aaKnown RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 FRA10AC1Q70Z53 315 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 PTGR2Q8N8N7 351 aaPredicted RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 CEP70Q8NHQ1 597 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 FUBP1Q96AE4 644 aaKnown RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 C6orf106Q9H6K1 298 aaPredicted RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 MID1IP1Q9NPA3 183 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 SLC17A4Q9Y2C5 497 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 PCDHGA4Q9Y5G9 962 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 A0A1W2PPC4 97 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 TMEM221A6NGB7 291 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 METTL12A8MUP2 240 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 G3V2L1 256 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 M0R296 226 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 CDC7O00311 574 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 BTN3A1O00481 513 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 SLCO2B1O94956 709 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 HNRNPCP07910 306 aaKnown RBP eCLIP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 ZNF8P17098 575 aaPredicted RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 HSPA14Q0VDF9 509 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 AMZ2Q86W34 360 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 BEND7Q8N7W2 519 aaPredicted RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 GFM2Q969S9 779 aaKnown RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 PTCD3Q96EY7 689 aaKnown RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 WDR92Q96MX6 357 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 DPEP2Q9H4A9 486 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 K7ESF4 209 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 RAD51BO15315 384 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 POP7O75817 140 aaKnown RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 HIST1H2AGP0C0S8 130 aaPredicted RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 XRCC1P18887 633 aaPredicted RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 HIST1H2ADP20671 130 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 CD27P26842 260 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 CTSCP53634 463 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 DNAJB13P59910 316 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 PFN3P60673 137 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 KLF10Q13118 480 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 BOP1Q14137 746 aaKnown RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 GK3PQ14409 553 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 GBX1Q14549 363 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 ZNF648Q5T619 568 aaPredicted RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 LIPMQ5VYY2 423 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 MBOAT1Q6ZNC8 495 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 GPSM1Q86YR5 675 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 GALNT13Q8IUC8 556 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 VPS33AQ96AX1 596 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 BIRC7Q96CA5 298 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 TUBGCP3Q96CW5 907 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 HIST1H2AHQ96KK5 128 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 HIST1H2AJQ99878 128 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 TIMM29Q9BSF4 260 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 H2AFJQ9BTM1 129 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 OXSMQ9NWU1 459 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 NDE1Q9NXR1 346 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 ACSL5Q9ULC5 683 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.52□□□□□ -0.89
CLDN18-202ENST00000343735 OR1A2Q9Y585 309 aa9.52□□□□□ -0.89
CLDN18-202ENST00000343735 NPEPPSL1A6NEC2 478 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 BOLA2-SMG1P6H3BVE0 249 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 SGTAO43765 313 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 SNX2O60749 519 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 IGHV4-34P06331 123 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 COX4I1P13073 169 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 CYP2A7P20853 494 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 YBX1P67809 324 aaKnown RBP9.51□□□□□ -0.89
CLDN18-202ENST00000343735 NFKB2Q00653 900 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 TSNQ15631 228 aaKnown RBP9.51□□□□□ -0.89
CLDN18-202ENST00000343735 RBBP7Q16576 425 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 WDR45BQ5MNZ6 344 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 TTC23LQ6PF05 361 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 DOK6Q6PKX4 331 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 IQCHQ86VS3 1027 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 WDR5BQ86VZ2 330 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 PELI3Q8N2H9 469 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 OXR1Q8N573 874 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 OR56A4Q8NGH8 313 aa9.51□□□□□ -0.89
CLDN18-202ENST00000343735 VCX3BQ9H321 246 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms