RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 HBEGFQ99075 208 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 DHRS7Q9Y394 339 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 NDUFB5O43674 189 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 GSTT2BP0CG30 244 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 DARSP14868 501 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CFL1P23528 166 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PAQR3Q6TCH7 311 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF367Q7RTV3 350 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 FAM220AQ7Z4H9 259 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 RNF180Q86T96 592 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SLC16A10Q8TF71 515 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 TMEM80Q96HE8 168 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PGLYRP2Q96PD5 576 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 MAGEH1Q9H213 219 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 I3L521 148 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SLC1A7O00341 560 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PITPNM1O00562 1244 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 GRID2O43424 1007 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 AKAP8O43823 692 aaKnown RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ECI2O75521 394 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 S100A6P06703 90 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 EBLN1P0CF75 366 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 HOXD10P28358 340 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 AQP1P29972 269 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SLC6A4P31645 630 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 BUD31P41223 144 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 MAGEA3P43357 314 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 DSC2Q02487 901 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ARHGAP15Q53QZ3 475 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 SLC15A3Q8IY34 581 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 METTL25Q8N6Q8 603 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF382Q96SR6 550 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 FAIM2Q9BWQ8 316 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 CD244Q9BZW8 370 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 DSN1Q9H410 356 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ABCB9Q9NP78 766 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 UPB1Q9UBR1 384 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF214Q9UL59 606 aaPredicted RBP4.69□□□□□ -1.66
CSMD3-203ENST00000343508 PCDHGA3Q9Y5H0 932 aa4.69□□□□□ -1.66
CSMD3-203ENST00000343508 GSTT2P0CG29 244 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 ZNF24P17028 368 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 CYP4F8P98187 520 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 RCAN2Q14206 197 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 TAS1R3Q7RTX0 852 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 PM20D2Q8IYS1 436 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 UBE2J2Q8N2K1 259 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 COPS8Q99627 209 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 YJEFN3A6XGL0 299 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 F8A1P23610 371 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 C1QTNF8P60827 252 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 SP2Q02086 613 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 PLD1Q13393 1074 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 EIF4HQ15056 248 aaKnown RBP4.68□□□□□ -1.66
CSMD3-203ENST00000343508 CPNE9Q8IYJ1 553 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 DCBLD1Q8N8Z6 715 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 PCSK9Q8NBP7 692 aaKnown RBP4.68□□□□□ -1.66
CSMD3-203ENST00000343508 HJURPQ8NCD3 748 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-203ENST00000343508 MZB1Q8WU39 189 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 JPH3Q8WXH2 748 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-203ENST00000343508 HYLS1Q96M11 299 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 TMEM246Q9BRR3 403 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 SMURF2Q9HAU4 748 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 MS4A12Q9NXJ0 267 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 GALPQ9UBC7 116 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 PDPK1O15530 556 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 CXCR3P49682 368 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.68□□□□□ -1.66
CSMD3-203ENST00000343508 LBX2Q6XYB7 198 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 DENND1CQ8IV53 801 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 GPR65Q8IYL9 337 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 GALNT6Q8NCL4 622 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 MYO19Q96H55 970 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 CDKN2AIPNLQ96HQ2 116 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 IL1RAPQ9NPH3 570 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 C12orf4Q9NQ89 552 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 DNAJC11Q9NVH1 559 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 STRCQ7RTU9 1775 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 GRXCR2A6NFK2 248 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 DCLK1O15075 740 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 JRKO75564 520 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 PSEN2P49810 448 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 CLCNKBP51801 687 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 RPL6Q02878 288 aaKnown RBP4.68□□□□□ -1.66
CSMD3-203ENST00000343508 HECTD3Q5T447 861 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 ZSWIM9Q86XI8 627 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 CEP97Q8IW35 865 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 CHERPQ8IWX8 916 aaKnown RBP4.68□□□□□ -1.66
CSMD3-203ENST00000343508 OXR1Q8N573 874 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 ABHD11Q8NFV4 315 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 AKAP1Q92667 903 aaKnown RBP eCLIP4.68□□□□□ -1.66
CSMD3-203ENST00000343508 MAPKAP1Q9BPZ7 522 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 DUSP26Q9BV47 211 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 ACTR6Q9GZN1 396 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 FLRT1Q9NZU1 646 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 CYTH4Q9UIA0 394 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 ZSCAN5BA6NJL1 495 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 EPOP01588 193 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 RETP07949 1114 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 CKBP12277 381 aa4.68□□□□□ -1.66
CSMD3-203ENST00000343508 IRAK1BP1Q5VVH5 260 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms