RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 NUAK2Q9H093 628 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 ZFP14Q9HCL3 533 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 ABCC13Q9NSE7 274 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 NLE1Q9NVX2 485 aaPredicted RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 TMEM248Q9NWD8 314 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 SAMD4AQ9UPU9 718 aaKnown RBP9.45□□□□□ -0.9
HOXA1-201ENST00000343060 GINS2Q9Y248 185 aa9.45□□□□□ -0.9
HOXA1-201ENST00000343060 A0A096LPI6 279 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 A0A0G2JLL6 359 aaPredicted RBP9.44□□□□□ -0.9
HOXA1-201ENST00000343060 UBA6A0AVT1 1052 aaPredicted RBP9.44□□□□□ -0.9
HOXA1-201ENST00000343060 PER2O15055 1255 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 MFN2O95140 757 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 APBA3O96018 575 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 PRSS56P0CW18 603 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 PCSK1P29120 753 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 EPHA2P29317 976 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 PTPN6P29350 595 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 FMO4P31512 558 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 ARHGDIAP52565 204 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 RPL38P63173 70 aaKnown RBP9.44□□□□□ -0.9
HOXA1-201ENST00000343060 PLIN5Q00G26 463 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 GALK2Q01415 458 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 TEKQ02763 1124 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 CREMQ03060 361 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 ABHD18Q0P651 414 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 ABRAXAS2Q15018 415 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 LRRC26Q2I0M4 334 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 TTLL9Q3SXZ7 439 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 PIK3R6Q5UE93 754 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 NXNL2Q5VZ03 156 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 SIGIRRQ6IA17 410 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 FAM171BQ6P995 826 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 GCNT7Q6ZNI0 430 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 PRRT2Q7Z6L0 340 aaPredicted RBP9.44□□□□□ -0.9
HOXA1-201ENST00000343060 PHACTR4Q8IZ21 702 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 DCBLD1Q8N8Z6 715 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 GRPEL2Q8TAA5 225 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 CD200R1Q8TD46 325 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 BLOC1S5Q8TDH9 187 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 TTC9Q92623 222 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 ESAMQ96AP7 390 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 TMCO6Q96DC7 493 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 HRASLS5Q96KN8 279 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 OR2A14Q96R47 310 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 RTP3Q9BQQ7 232 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 COPS4Q9BT78 406 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 CLPBQ9H078 707 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 SERHLQ9NQF3 203 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 CD274Q9NZQ7 290 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 RBPJLQ9UBG7 517 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 SNX6Q9UNH7 406 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 NLRC5Q86WI3 1866 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 A0A075B6Q4 140 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 SMIM35A0A1B0GVV1 85 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 CENPXA8MT69 81 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 VPS26AO75436 327 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 UGT2B17O75795 530 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 CCNDBP1O95273 360 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 CDK1P06493 297 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 MAGP20916 626 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 SLC15A1P46059 708 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 RACK1P63244 317 aaKnown RBP9.44□□□□□ -0.9
HOXA1-201ENST00000343060 PTGR1Q14914 329 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 DUSP7Q16829 419 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 YIF1BQ5BJH7 314 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 ZCCHC8Q6NZY4 707 aaKnown RBP9.44□□□□□ -0.9
HOXA1-201ENST00000343060 C19orf48Q6RUI8 117 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 GALNT12Q8IXK2 581 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 BEND7Q8N7W2 519 aaPredicted RBP9.44□□□□□ -0.9
HOXA1-201ENST00000343060 GALNT6Q8NCL4 622 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 OR4F6Q8NGB9 312 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 HCAR2Q8TDS4 363 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 TMEM40Q8WWA1 233 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 FAM120BQ96EK7 910 aaKnown RBP9.44□□□□□ -0.9
HOXA1-201ENST00000343060 DEPDC7Q96QD5 511 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 TRIB3Q96RU7 358 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 PKMYT1Q99640 499 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 DPY30Q9C005 99 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 KATNBL1Q9H079 304 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 KCNH6Q9H252 994 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 MROH8Q9H579 483 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 SLC6A13Q9NSD5 602 aa9.44□□□□□ -0.9
HOXA1-201ENST00000343060 TNPO3Q9Y5L0 923 aaKnown RBP9.44□□□□□ -0.9
HOXA1-201ENST00000343060 MBLAC1A4D2B0 266 aaPredicted RBP9.43□□□□□ -0.9
HOXA1-201ENST00000343060 GOLGA8CPA6NN73 597 aa9.43□□□□□ -0.9
HOXA1-201ENST00000343060 OTCP00480 354 aa9.43□□□□□ -0.9
HOXA1-201ENST00000343060 KRT6AP02538 564 aa9.43□□□□□ -0.9
HOXA1-201ENST00000343060 KRT6BP04259 564 aa9.43□□□□□ -0.9
HOXA1-201ENST00000343060 ABCB1P08183 1280 aaPredicted RBP9.43□□□□□ -0.9
HOXA1-201ENST00000343060 ITGA2P17301 1181 aa9.43□□□□□ -0.9
HOXA1-201ENST00000343060 RPS5P46782 204 aaKnown RBP9.43□□□□□ -0.9
HOXA1-201ENST00000343060 ITGA1P56199 1179 aa9.43□□□□□ -0.9
HOXA1-201ENST00000343060 RPP38P78345 283 aaKnown RBP9.43□□□□□ -0.9
HOXA1-201ENST00000343060 MRPS15P82914 257 aaKnown RBP9.43□□□□□ -0.9
HOXA1-201ENST00000343060 NPRL3Q12980 569 aa9.43□□□□□ -0.9
HOXA1-201ENST00000343060 IRF3Q14653 427 aa9.43□□□□□ -0.9
HOXA1-201ENST00000343060 LAPTM4AQ15012 233 aa9.43□□□□□ -0.9
HOXA1-201ENST00000343060 DDR2Q16832 855 aa9.43□□□□□ -0.9
HOXA1-201ENST00000343060 SPANXN2Q5MJ10 180 aa9.43□□□□□ -0.9
HOXA1-201ENST00000343060 CTSL3PQ5NE16 218 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms