RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 NDC80O14777 642 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 CREG1O75629 220 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 PKMP14618 531 aaKnown RBP12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 PGAM1P18669 254 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 CHRM3P20309 590 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 PAFAH1B1P43034 410 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 LSM11P83369 360 aaKnown RBP eCLIP12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 ABRQ12979 859 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 GBX1Q14549 363 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 NAA25Q14CX7 972 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZNF789Q5FWF6 425 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 FBXO38Q6PIJ6 1188 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 CDHR3Q6ZTQ4 885 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 NEK10Q6ZWH5 1172 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 CENPUQ71F23 418 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZNF605Q86T29 641 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 SYVN1Q86TM6 617 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 DSELQ8IZU8 1212 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZBTB2Q8N680 514 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 EXD3Q8N9H8 876 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 CFAP61Q8NHU2 1237 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 FLVCR1-AS1Q8TAF5 88 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 HMGCLL1Q8TB92 370 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 CT55Q8WUE5 264 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 APOBEC4Q8WW27 367 aaKnown RBP12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 KCNJ9Q92806 393 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 SIGLEC10Q96LC7 697 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 DDX47Q9H0S4 455 aaKnown RBP12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 ACTR5Q9H9F9 607 aaPredicted RBP12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 STARD5Q9NSY2 213 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 SPHK1Q9NYA1 384 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 SPATA7Q9P0W8 599 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 CRYL1Q9Y2S2 319 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 B8ZZF3 427 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 MEN1O00255 615 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 NIPSNAP2O75323 286 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 KATNA1O75449 491 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 MATN4O95460 622 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 C1orf105O95561 183 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 RAB40ALP0C0E4 278 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 FAM87AP0C7U9 286 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 PRKAR1AP10644 381 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 F8A1P23610 371 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 PTPN4P29074 926 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 OAS2P29728 719 aaKnown RBP12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 RORAP35398 523 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 POLE2P56282 527 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 DR1Q01658 176 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 KCNAB2Q13303 367 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 GRB7Q14451 532 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 MORF4L2Q15014 288 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 TLDC1Q6P9B6 456 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 CREG2Q8IUH2 290 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 C17orf53Q8N3J3 647 aaPredicted RBP12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 LINC01555Q8NAE3 123 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 OR1L3Q8NH93 324 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 DENND1AQ8TEH3 1009 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 THAP4Q8WY91 577 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 ANKRD7Q92527 254 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 MR1Q95460 341 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 CLIP3Q96DZ5 547 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 SEMA4CQ9C0C4 833 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 SLC7A5P2Q9GIP4 190 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 ACTL8Q9H568 366 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 FAM114A2Q9NRY5 505 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 C20orf96Q9NUD7 363 aaPredicted RBP12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 PLAGL1Q9UM63 463 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 SRPK3Q9UPE1 567 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 POLHQ9Y253 713 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 FAM169AQ9Y6X4 670 aa12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 FASNP49327 2511 aaKnown RBP12.86□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZNF839A8K0R7 811 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 KIF2AO00139 706 aaPredicted RBP12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 EIF3FO00303 357 aaPredicted RBP12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 CD63P08962 238 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 ENO3P13929 434 aaPredicted RBP12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 PVRP15151 417 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 PEBP1P30086 187 aaKnown RBP12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 HSD17B2P37059 387 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 CLCN7P51798 805 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 GPS2Q13227 327 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 CRYMQ14894 314 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 UGT8Q16880 541 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 SPANXN3Q5MJ09 141 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 LRRC8EQ6NSJ5 796 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 C16orf46Q6P387 395 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 KIAA0408Q6ZU52 694 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 TRIM73Q86UV7 250 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 PDIK1LQ8N165 341 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 PROKR1Q8TCW9 393 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZUFSPQ96AP4 578 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 LRRC39Q96DD0 335 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 NRTNQ99748 197 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 NLNQ9BYT8 704 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 SLC25A18Q9H1K4 315 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 PCMTD2Q9NV79 361 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 PLCL2Q9UPR0 1127 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 KLK4Q9Y5K2 254 aa12.85□□□□□ -0.35
SIRPB3P-201ENST00000340424 MRPS18BQ9Y676 258 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms