RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 VPS4BO75351 444 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 TGFB1P01137 390 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 ACP5P13686 325 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 RPS3P23396 243 aaKnown RBP eCLIP9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 S100A3P33764 101 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 ACSM2AQ08AH3 577 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 GSTA3Q16772 222 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 CATSPEREQ5SY80 951 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 ACSM2BQ68CK6 577 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 TMEM214Q6NUQ4 689 aaKnown RBP9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 THOC6Q86W42 341 aaKnown RBP9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 HEATR4Q86WZ0 1026 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 KIAA2013Q8IYS2 634 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 FGF14Q92915 247 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 ISG20Q96AZ6 181 aaKnown RBP9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 MCCC1Q96RQ3 725 aaPredicted RBP9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 PRPF18Q99633 342 aaKnown RBP9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 SPASTQ9UBP0 616 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 MSRAQ9UJ68 235 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 CA5BQ9Y2D0 317 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 H3BQ06 376 aaPredicted RBP9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 COX7A2P14406 83 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 ADSLP30566 484 aaPredicted RBP9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 GJA4P35212 333 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 MMP12P39900 470 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 LAPTM4AQ15012 233 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 PDK3Q15120 406 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 PDGFRLQ15198 375 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 HKDC1Q2TB90 917 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 TMEM259Q4ZIN3 620 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 VITQ6UXI7 678 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 PDPRQ8NCN5 879 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 OR2T34Q8NGX1 318 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 OR2T3Q8NH03 318 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 SLC13A3Q8WWT9 602 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 XKR8Q9H6D3 395 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 ZDHHC7Q9NXF8 308 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 INVSQ9Y283 1065 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 RWDD3Q9Y3V2 267 aa9.9□□□□□ -0.82
RBFOX1-202ENST00000340209 E2F6O75461 281 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 SNUPNO95149 360 aaKnown RBP9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 BCKDHAP12694 445 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 GSSP48637 474 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 CSNK1DP48730 415 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 ALDH9A1P49189 494 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 ADARP55265 1226 aaKnown RBP9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 PCBP2Q15366 365 aaKnown RBP eCLIP9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 PDE12Q6L8Q7 609 aaKnown RBP9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 OFCC1Q8IZS5 231 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 OR7A2PQ8NGA2 310 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 NSMCE2Q96MF7 247 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 OR51B5Q9H339 312 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 C1orf109Q9NX04 203 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 VAPAQ9P0L0 249 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 SNX6Q9UNH7 406 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 LZTS1Q9Y250 596 aa9.9□□□□□ -0.83
RBFOX1-202ENST00000340209 TBC1D3DA0A087WVF3 549 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TBC1D3IA0A087WXS9 549 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TBC1D3EA0A087X179 549 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TBC1D3KA0A087X1G2 549 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TRBV5-4A0A0C4DH59 114 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 ASPDHA6ND91 283 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TBC1D3FA6NER0 549 aaPredicted RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TBC1D3LB9A6J9 549 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 KCNH1O95259 989 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 C1QCP02747 245 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 LYNP07948 512 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TBC1D3HP0C7X1 549 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 ZNF30P17039 623 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 IST1P53990 364 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 RUNX3Q13761 415 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 HNRNPA1L2Q32P51 320 aaKnown RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TBC1D3GQ6DHY5 549 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 GLYATQ6IB77 296 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TBC1D3CQ6IPX1 549 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 KIAA1324Q6UXG2 1013 aaKnown RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 PDSS2Q86YH6 399 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TBC1D3Q8IZP1 549 aaPredicted RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 CBR4Q8N4T8 237 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 MAGEE2Q8TD90 523 aaPredicted RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 PPP2R3CQ969Q6 453 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 LMLNQ96KR4 655 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 INPP5KQ9BT40 448 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 SERGEFQ9UGK8 458 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 MAFFQ9ULX9 164 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 FXYD1O00168 92 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 SOAT1P35610 550 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 RPS14P62263 151 aaKnown RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 DLX2Q07687 328 aaPredicted RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 DOC2AQ14183 400 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 ELAVL3Q14576 367 aaKnown RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 ZXDCQ2QGD7 858 aaPredicted RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 CBARPQ8N350 705 aaPredicted RBP9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 ZNF740Q8NDX6 193 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 PPP1R16AQ96I34 528 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 MYADMQ96S97 322 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 SLC29A1Q99808 456 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 TRIM15Q9C019 465 aa9.89□□□□□ -0.83
RBFOX1-202ENST00000340209 SFXN1Q9H9B4 322 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms