RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 DIO3P55073 304 aa20.58■□□□□ 0.89
VRK2-201ENST00000340157 SLC25A3Q00325 362 aa20.58■□□□□ 0.89
VRK2-201ENST00000340157 LRRC32Q14392 662 aa20.58■□□□□ 0.89
VRK2-201ENST00000340157 HABP4Q5JVS0 413 aaKnown RBP20.58■□□□□ 0.89
VRK2-201ENST00000340157 RNF165Q6ZSG1 346 aa20.58■□□□□ 0.89
VRK2-201ENST00000340157 MYLK4Q86YV6 388 aaPredicted RBP20.58■□□□□ 0.89
VRK2-201ENST00000340157 FRMD1Q8N878 549 aa20.58■□□□□ 0.89
VRK2-201ENST00000340157 RP9Q8TA86 221 aaKnown RBP20.58■□□□□ 0.89
VRK2-201ENST00000340157 TFGQ92734 400 aaPredicted RBP20.58■□□□□ 0.89
VRK2-201ENST00000340157 SLC29A3Q9BZD2 475 aa20.58■□□□□ 0.89
VRK2-201ENST00000340157 PNMA8BQ9ULN7 279 aaPredicted RBP20.58■□□□□ 0.89
VRK2-201ENST00000340157 ASF1AQ9Y294 204 aa20.58■□□□□ 0.89
VRK2-201ENST00000340157 DNAH14Q0VDD8 3507 aa20.58■□□□□ 0.89
VRK2-201ENST00000340157 PCM1Q15154 2024 aa20.58■□□□□ 0.89
VRK2-201ENST00000340157 KANSL1LA0AUZ9 987 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 A8MUI8 341 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 PSMD12O00232 456 aaPredicted RBP20.58■□□□□ 0.88
VRK2-201ENST00000340157 FPGTO14772 594 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 LSM1O15116 133 aaKnown RBP20.58■□□□□ 0.88
VRK2-201ENST00000340157 SCAMP1O15126 338 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 WFS1O76024 890 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 THRAP10827 490 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 FASTKQ14296 549 aaKnown RBP20.58■□□□□ 0.88
VRK2-201ENST00000340157 CPSF6Q16630 551 aaKnown RBP eCLIP20.58■□□□□ 0.88
VRK2-201ENST00000340157 C6orf136Q5SQH8 315 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 FBXW10Q5XX13 1052 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 CAPRIN2Q6IMN6 1127 aaKnown RBP20.58■□□□□ 0.88
VRK2-201ENST00000340157 PAOXQ6QHF9 649 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 GALNT13Q8IUC8 556 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 TMEM145Q8NBT3 493 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 TOE1Q96GM8 510 aaKnown RBP20.58■□□□□ 0.88
VRK2-201ENST00000340157 SLC45A3Q96JT2 553 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 NRTNQ99748 197 aa20.58■□□□□ 0.88
VRK2-201ENST00000340157 PRSS38A1L453 326 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 KLHL33A6NCF5 533 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 FAM170BA6NMN3 283 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 E7EQ34 232 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 CLCNKAP51800 687 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 TBPL1P62380 186 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 CYLC2Q14093 348 aaPredicted RBP20.57■□□□□ 0.88
VRK2-201ENST00000340157 NFATC4Q14934 902 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 DUS1LQ6P1R4 473 aaKnown RBP20.57■□□□□ 0.88
VRK2-201ENST00000340157 FUNDC1Q8IVP5 155 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 SIX5Q8N196 739 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 OR1E3Q8WZA6 343 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 PDXPQ96GD0 296 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 RAB3IPQ96QF0 476 aaPredicted RBP20.57■□□□□ 0.88
VRK2-201ENST00000340157 RTKNQ9BST9 563 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 RIC8BQ9NVN3 520 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 MOSPD1Q9UJG1 213 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 GPR45Q9Y5Y3 372 aa20.57■□□□□ 0.88
VRK2-201ENST00000340157 VCANP13611 3396 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 ITGAXP20702 1163 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 GNPDA1P46926 289 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 MNAT1P51948 309 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 CHIT1Q13231 466 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 CUL3Q13618 768 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 AGKQ53H12 422 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 TRIM46Q7Z4K8 759 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 SPATA19Q7Z5L4 167 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 TSTD1Q8NFU3 115 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 OR5K2Q8NHB8 316 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 IL17FQ96PD4 163 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 C1orf50Q9BV19 199 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 SDR39U1Q9NRG7 319 aaPredicted RBP20.56■□□□□ 0.88
VRK2-201ENST00000340157 CCDC167Q9P0B6 97 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 FBXL21Q9UKT6 434 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 ACSL5Q9ULC5 683 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 ZNF490Q9ULM2 529 aaPredicted RBP20.56■□□□□ 0.88
VRK2-201ENST00000340157 PLAGL1Q9UM63 463 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 SH2B3Q9UQQ2 575 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 MRPS17Q9Y2R5 130 aaKnown RBP20.56■□□□□ 0.88
VRK2-201ENST00000340157 E7ENX8 843 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 ULK1O75385 1050 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 NME5P56597 212 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 ERVK-8P63133 956 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 MXRA7P84157 204 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 TAP2Q03519 686 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 SGO1Q5FBB7 561 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 CYB5D1Q6P9G0 228 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 DCUN1D3Q8IWE4 304 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 SYTL1Q8IYJ3 562 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 FAM13CQ8NE31 585 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 RCN3Q96D15 328 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 MENTQ9BUN1 341 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 SGPP1Q9BX95 441 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 OSGEPL1Q9H4B0 414 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 PFDN4Q9NQP4 134 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 MRGBPQ9NV56 204 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 AIG1Q9NVV5 245 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 WSB2Q9NYS7 404 aaPredicted RBP20.56■□□□□ 0.88
VRK2-201ENST00000340157 GPSM3Q9Y4H4 160 aa20.56■□□□□ 0.88
VRK2-201ENST00000340157 PDYNP01213 254 aa20.55■□□□□ 0.88
VRK2-201ENST00000340157 SLC35G4P0C7Q5 338 aa20.55■□□□□ 0.88
VRK2-201ENST00000340157 HALP42357 657 aa20.55■□□□□ 0.88
VRK2-201ENST00000340157 HMGCS1Q01581 520 aa20.55■□□□□ 0.88
VRK2-201ENST00000340157 PCDH1Q08174 1060 aa20.55■□□□□ 0.88
VRK2-201ENST00000340157 ZRSR2Q15696 482 aaKnown RBP20.55■□□□□ 0.88
VRK2-201ENST00000340157 ATP6AP1LQ52LC2 224 aa20.55■□□□□ 0.88
VRK2-201ENST00000340157 KIAA0895LQ68EN5 471 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms