RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 C9orf152Q5JTZ5 239 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 TSTD2Q5T7W7 516 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 LRRC38Q5VT99 294 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 SAXO2Q658L1 398 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 VASNQ6EMK4 673 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 PLET1Q6UQ28 207 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 FAM131AQ6UXB0 335 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 PHF13Q86YI8 300 aaPredicted RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ADGRG2Q8IZP9 1017 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 FSTL5Q8N475 847 aaPredicted RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 DNAJB8Q8NHS0 232 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 LRRC58Q96CX6 371 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 AURKBQ96GD4 344 aaPredicted RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 SENP8Q96LD8 212 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 PARK7Q99497 189 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 RBCK1Q9BYM8 510 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 MAGEB5Q9BZ81 275 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 NXF2Q9GZY0 626 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 LDAHQ9H6V9 325 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ACAD9Q9H845 621 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 PRDM9Q9NQV7 894 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 DNAJC11Q9NVH1 559 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ABCD2Q9UBJ2 740 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ZNF222Q9UK12 451 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 PCDHGB1Q9Y5G3 927 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 LOC102723532A0A0G2JNH3 316 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 TRABD2BA6NFA1 517 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 MYL12BO14950 172 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 EIF3GO75821 320 aaKnown RBP eCLIP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 TOXO94900 526 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 CST1P01037 141 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ACAA1P09110 424 aaPredicted RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 TPH1P17752 444 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 MYL12AP19105 171 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ACO1P21399 889 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ACADLP28330 430 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 NUDT6P53370 316 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 MXD1Q05195 221 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 NFYCQ13952 458 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 PROX2Q3B8N5 592 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 SBK1Q52WX2 424 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 KLHL12Q53G59 568 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 IRAK1BP1Q5VVH5 260 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 PYHIN1Q6K0P9 492 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 RNF135Q8IUD6 432 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 TMEM151AQ8N4L1 468 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 GPR156Q8NFN8 814 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 OR7G3Q8NG95 312 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 EDARADDQ8WWZ3 215 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 RXFP2Q8WXD0 754 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 TMEM125Q96AQ2 219 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 WBP1Q96G27 269 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 MRPL48Q96GC5 212 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ZNF285Q96NJ3 590 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 POMKQ9H5K3 350 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 APOBEC3GQ9HC16 384 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 EXOSC4Q9NPD3 245 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 ZNF112Q9UJU3 913 aa9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 PPIEQ9UNP9 301 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-201ENST00000339488 CNTNAP4Q9C0A0 1308 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 OR6C65A6NJZ3 312 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 PLA2G10O15496 165 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 RGS11O94810 467 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 KDM4BO94953 1096 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 OAZ2O95190 189 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 TNNC2P02585 160 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 CSF3P09919 207 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 CKMT1AP12532 417 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 HSD17B1P14061 328 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 MAGEA3P43357 314 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 KCNJ3P48549 501 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 CDK8P49336 464 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 HNMTP50135 292 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 HSF2Q03933 536 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 LRRC74AQ0VAA2 488 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 FADDQ13158 208 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 ITPK1Q13572 414 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 FCN2Q15485 313 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 SWI5Q1ZZU3 235 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 PDZK1Q5T2W1 519 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 TMEM88Q6PEY1 159 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 HIPK1Q86Z02 1210 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 TBC1D19Q8N5T2 526 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 MS4A15Q8N5U1 240 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 GDPD1Q8N9F7 314 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 ATAD1Q8NBU5 361 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 OR8D4Q8NGM9 314 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 ZNF516Q92618 1163 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 COPS5Q92905 334 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 ZNF669Q96BR6 464 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 RNF157Q96PX1 679 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 MRPL4Q9BYD3 311 aaKnown RBP9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 SRRQ9GZT4 340 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 IL22Q9GZX6 179 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 RERGLQ9H628 205 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 UBQLN2Q9UHD9 624 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 LHX6Q9UPM6 363 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 ATF5Q9Y2D1 282 aaPredicted RBP9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 SNED1Q8TER0 1413 aa9.44□□□□□ -0.9
PTCHD4-201ENST00000339488 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms