RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 NIPSNAP2O75323 286 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 OR4F21O95013 312 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 KCNH1O95259 989 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 TBX18O95935 607 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 MT-CO1P00395 513 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 ALBP02768 609 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 ALPLP05186 524 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 IL6P05231 212 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 EBLN1P0CF75 366 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 DGKAP23743 735 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 IL12AP29459 219 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 CTHP32929 405 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 RGRP47804 291 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 CCR3P51677 355 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 ARSFP54793 590 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 ERVPABLB-1P60509 514 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 UFM1P61960 85 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 ARF5P84085 180 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 CHRNB3Q05901 458 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 TRAF2Q12933 501 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 CAPRIN1Q14444 709 aaKnown RBP10.54□□□□□ -0.72
RTN3-201ENST00000338850 GPR33Q49SQ1 333 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 PITRM1Q5JRX3 1037 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 ADGRF1Q5T601 910 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 ATG9BQ674R7 924 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 GLYATQ6IB77 296 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 CXorf57Q6NSI4 855 aaKnown RBP10.54□□□□□ -0.72
RTN3-201ENST00000338850 CYP20A1Q6UW02 462 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 MACC1Q6ZN28 852 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 LYSMD3Q7Z3D4 306 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 GOLGA7Q7Z5G4 137 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 RALGPS2Q86X27 583 aaPredicted RBP10.54□□□□□ -0.72
RTN3-201ENST00000338850 CIR1Q86X95 450 aaPredicted RBP10.54□□□□□ -0.72
RTN3-201ENST00000338850 FAM217AQ8IXS0 508 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 PLPP6Q8IY26 295 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 PIANPQ8IYJ0 282 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 RBFAQ8N0V3 343 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 PGBD3Q8N328 593 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 ZNF786Q8N393 782 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 SFRP1Q8N474 314 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 DCAF4L2Q8NA75 395 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 FNDC5Q8NAU1 212 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 LPCAT1Q8NF37 534 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 OR13F1Q8NGS4 319 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 FNDC8Q8TC99 324 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 MIPOL1Q8TD10 442 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 ZNF566Q969W8 418 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 MYEOVQ96EZ4 313 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 NRBF2Q96F24 287 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 NSMCE3Q96MG7 304 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 LYSMD1Q96S90 227 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 ZBTB18Q99592 522 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 SMG9Q9H0W8 520 aaKnown RBP10.54□□□□□ -0.72
RTN3-201ENST00000338850 CCSER2Q9H7U1 834 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 CD274Q9NZQ7 290 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 DNAJB9Q9UBS3 223 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 EGFL7Q9UHF1 273 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 EIF2B4Q9UI10 523 aaKnown RBP10.54□□□□□ -0.72
RTN3-201ENST00000338850 FKBPLQ9UIM3 349 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 BLOC1S6Q9UL45 172 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 EIF3LQ9Y262 564 aaKnown RBP10.54□□□□□ -0.72
RTN3-201ENST00000338850 NAALAD2Q9Y3Q0 740 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 PKP3Q9Y446 797 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 PTGDR2Q9Y5Y4 395 aa10.54□□□□□ -0.72
RTN3-201ENST00000338850 FRYLO94915 3013 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 A0A0J9YVX5 310 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 A0A1B0GTL3 188 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 A0A1B0GTW7 788 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 A0A1B0GVG6 124 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 ZNF840PA6NDX5 716 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 C16orf96A6NNT2 1141 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 FFAR2O15552 330 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 ERN1O75460 977 aaKnown RBP10.53□□□□□ -0.72
RTN3-201ENST00000338850 GMNNO75496 209 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 SEC14L2O76054 403 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 STC2O76061 302 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 THRBP10828 461 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 CHRM3P20309 590 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 PRDX3P30048 256 aaKnown RBP10.53□□□□□ -0.72
RTN3-201ENST00000338850 AKT1P31749 480 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 GTF2H2Q13888 395 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 SPIDRQ14159 915 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 LRRC32Q14392 662 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 PTPRCAPQ14761 206 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 TAF12Q16514 161 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 TIGD2Q4W5G0 525 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 RABL3Q5HYI8 236 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 LRIF1Q5T3J3 769 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 BROXQ5VW32 411 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 GTF2H2CQ6P1K8 395 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 LETMD1Q6P1Q0 360 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 FRA10AC1Q70Z53 315 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 SNX20Q7Z614 316 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 CPNE9Q8IYJ1 553 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 CMTM8Q8IZV2 173 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 TCAIMQ8N3R3 496 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 SPEM1Q8N4L4 309 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 DTWD1Q8N5C7 304 aa10.53□□□□□ -0.72
RTN3-201ENST00000338850 CELF5Q8N6W0 485 aaKnown RBP10.53□□□□□ -0.72
RTN3-201ENST00000338850 SIDT2Q8NBJ9 832 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms