RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 TRNAU1APQ9NX07 287 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SCHIP1Q9P0W5 487 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TBC1D29Q9UFV1 150 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 KLF15Q9UIH9 416 aa14.33□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PCM1Q15154 2024 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 A0A1W2PR77 199 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TMEM221A6NGB7 291 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 OR52A4PA6NMU1 304 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 M0R296 226 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 HOXA6P31267 233 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 LSM12Q3MHD2 195 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ACAD11Q709F0 780 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ARMCX6Q7L4S7 300 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TBC1D21Q8IYX1 336 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 IL17FQ96PD4 163 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 NTMT1Q9BV86 223 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 MEAF6Q9HAF1 191 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PRMT8Q9NR22 394 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ZFP69BQ9UJL9 534 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 BTRCQ9Y297 605 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PTGDR2Q9Y5Y4 395 aa14.32□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CCDC163A0A0D9SF12 145 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 E9PBE3 544 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 FCHO1O14526 889 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 LAMTOR5O43504 91 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 KLHL41O60662 606 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 EML2O95834 649 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CAPN1P07384 714 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PNLIPRP1P54315 467 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 INHBCP55103 352 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 RACK1P63244 317 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TSTA3Q13630 321 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 RPE65Q16518 533 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TCHHL1Q5QJ38 904 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 NXNQ6DKJ4 435 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CCDC121Q6ZUS5 278 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 NRROSQ86YC3 692 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 DCP2Q8IU60 420 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 DDIASQ8IXT1 998 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 KLHDC8AQ8IYD2 350 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 RGL4Q8IZJ4 473 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 METTL6Q8TCB7 284 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 MAELQ96JY0 434 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 NRTNQ99748 197 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 NMUR2Q9GZQ4 415 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TUBB1Q9H4B7 451 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TM9SF3Q9HD45 589 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 RNF11Q9Y3C5 154 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ARHGEF17Q96PE2 2063 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 E7ENX8 843 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PIP5K1BO14986 540 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 UBOX5O94941 541 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SERPINA6P08185 405 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 EBLN1P0CF75 366 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 HGFP14210 728 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 HALP42357 657 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TBPL1P62380 186 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TAP2Q03519 686 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ILF3Q12906 894 aaKnown RBP eCLIP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CDC16Q13042 620 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 FASTKQ14296 549 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 KRT33BQ14525 404 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ABRAXAS1Q6UWZ7 409 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PARGQ86W56 976 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 MYLK4Q86YV6 388 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 LRRC56Q8IYG6 542 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 C2orf73Q8N5S3 287 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 C19orf60Q96EN9 201 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 C3orf30Q96M34 536 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 OR4K3Q96R72 315 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 NUSAP1Q9BXS6 441 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 DUSP15Q9H1R2 295 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ACTR8Q9H981 624 aa14.31□□□□□ -0.12
CDK5RAP3-201ENST00000338399 MUC3AQ02505 3323 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PRAMEF33A0A0G2JMD5 474 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ATP6AP2A0A1C7CYW4 349 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CCDC22O60826 627 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ATP6AP2O75787 350 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CLDN9O95484 217 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CHEK2O96017 543 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ENO1P06733 434 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 LINC00032P0C843 101 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 TDGF1P13385 188 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 NCF2P19878 526 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 HMOX2P30519 316 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CSTF1Q05048 431 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SPDYAQ5MJ70 313 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CAPN13Q6MZZ7 669 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SCIMPQ6UWF3 145 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 SUSD1Q6UWL2 747 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 WASH2PQ6VEQ5 465 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 EFL1Q7Z2Z2 1120 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CLNKQ7Z7G1 428 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 PHACTR4Q8IZ21 702 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 C1orf216Q8TAB5 229 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 GPBAR1Q8TDU6 330 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CAMK1GQ96NX5 476 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 CCDC28BQ9BUN5 200 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 WASH6PQ9NQA3 447 aa14.3□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ARMCX1Q9P291 453 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms