RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 MEAF6Q9HAF1 191 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 THUMPD1Q9NXG2 353 aaKnown RBP12.98□□□□□ -0.33
COL2A1-201ENST00000337299 SLAMF8Q9P0V8 285 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 NLKQ9UBE8 527 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 SIX4Q9UIU6 781 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 IFNA16P05015 189 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 DNAJA1P31689 397 aaKnown RBP12.98□□□□□ -0.33
COL2A1-201ENST00000337299 CA5AP35218 305 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 STARP49675 285 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 SH3BP2P78314 561 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 HSF2Q03933 536 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 CDK5R2Q13319 367 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 FGFBP1Q14512 234 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 VEPH1Q14D04 833 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 ACOX1Q15067 660 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 TECRLQ5HYJ1 363 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 TMEM135Q86UB9 458 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 DTWD1Q8N5C7 304 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 C3orf30Q96M34 536 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 OR51E2Q9H255 320 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 ATP13A1Q9HD20 1204 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 ABCG2Q9UNQ0 655 aa12.98□□□□□ -0.33
COL2A1-201ENST00000337299 NFASCO94856 1347 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-201ENST00000337299 CTDSP2O14595 271 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 TPST2O60704 377 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 LGALS2P05162 132 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 SSTR4P31391 388 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 NNMTP40261 264 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 AP2S1P53680 142 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-201ENST00000337299 RPP38P78345 283 aaKnown RBP12.97□□□□□ -0.33
COL2A1-201ENST00000337299 FOXM1Q08050 763 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 ZNF177Q13360 481 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-201ENST00000337299 UAP1L1Q3KQV9 507 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 OR10G2Q8NGC3 310 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 ASB8Q9H765 288 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 CAPN10Q9HC96 672 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 CTPS2Q9NRF8 586 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 DUS2Q9NX74 493 aaKnown RBP12.97□□□□□ -0.33
COL2A1-201ENST00000337299 ARL5AQ9Y689 179 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 PHLPP1O60346 1717 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 AGAP5A6NIR3 686 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 SLC30A4O14863 429 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 PDPK1O15530 556 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 SGTAO43765 313 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 NIPSNAP2O75323 286 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 ANXA5P08758 320 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 TYMPP19971 482 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 PRKAG1P54619 331 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 RHOAP61586 193 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 CREB5Q02930 508 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 SELENBP1Q13228 472 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 ADAMTS16Q8TE57 1224 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 OAS3Q9Y6K5 1087 aaKnown RBP12.97□□□□□ -0.33
COL2A1-201ENST00000337299 CHD4Q14839 1912 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 COL14A1Q05707 1796 aaKnown RBP12.97□□□□□ -0.33
COL2A1-201ENST00000337299 C17orf102A2RUQ5 167 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 SLC35F4A4IF30 521 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 FAM72CH0Y354 149 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 SULT1C4O75897 302 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 ALDH1A2O94788 518 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 APOL3O95236 402 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 PLATP00750 562 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 CTPS1P17812 591 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 ITPKAP23677 461 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 HOXD10P28358 340 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 CDH5P33151 784 aaPredicted RBP12.97□□□□□ -0.33
COL2A1-201ENST00000337299 LHX1P48742 406 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 FOXA1P55317 472 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 FAM189BP81408 668 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 STX4Q12846 297 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 UNC50Q53HI1 259 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 PXDC1Q5TGL8 231 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 FAM72AQ5TYM5 149 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 FAM72DQ6L9T8 149 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 CDC73Q6P1J9 531 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 BLOC1S3Q6QNY0 202 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 CXCL17Q6UXB2 119 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 USP45Q70EL2 814 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 FAM72BQ86X60 149 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 TRPV1Q8NER1 839 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 XYLT2Q9H1B5 865 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 CCSER2Q9H7U1 834 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 PPIEQ9UNP9 301 aaKnown RBP12.97□□□□□ -0.33
COL2A1-201ENST00000337299 N6AMT1Q9Y5N5 214 aa12.97□□□□□ -0.33
COL2A1-201ENST00000337299 ZCWPW2A0A1B0GU75 182 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 ANKDD1BA6NHY2 528 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 INMT-MINDY4F8WBC2 141 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 IFNA7P01567 189 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 RPL35P42766 123 aaKnown RBP12.96□□□□□ -0.33
COL2A1-201ENST00000337299 CPT1AP50416 773 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 HNRNPA0Q13151 305 aaKnown RBP12.96□□□□□ -0.33
COL2A1-201ENST00000337299 KRT33BQ14525 404 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 SLC9A5Q14940 896 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 C6orf136Q5SQH8 315 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 CYP4Z2PQ8N1L4 340 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 GTF2H4Q92759 462 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 PYURFQ96I23 114 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 FOPNLQ96NB1 174 aa12.96□□□□□ -0.33
COL2A1-201ENST00000337299 SLC39A8Q9C0K1 460 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms