RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 H2AFJQ9BTM1 129 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 SLC2A11Q9BYW1 496 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 HEBP1Q9NRV9 189 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 ZIM2Q9NZV7 527 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 ADGRE2Q9UHX3 823 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 PCYT1BQ9Y5K3 369 aaPredicted RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 TCF20Q9UGU0 1960 aaKnown RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 ARHGEF33A8MVX0 844 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 PRRT4C9JH25 899 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 SGTAO43765 313 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 ZNF682O95780 498 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 CYP4B1P13584 511 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 TIMP2P16035 220 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 RPS3P23396 243 aaKnown RBP eCLIP8.62□□□□□ -1.03
SNCA-201ENST00000336904 RFC2P35250 354 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 PPM1AP35813 382 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 MTHFRP42898 656 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 CYP4F3Q08477 520 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 SPIDRQ14159 915 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 STARD3Q14849 445 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 NEDD8Q15843 81 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 ANGPTL8Q6UXH0 198 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 CCDC149Q6ZUS6 474 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 ZNF551Q7Z340 670 aaPredicted RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 ADGRD2Q7Z7M1 963 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 GALNT5Q7Z7M9 940 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 CPXM2Q8N436 756 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 TMBIM1Q969X1 311 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 ECHDC3Q96DC8 303 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 RMND5BQ96G75 393 aaPredicted RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 PDLIM5Q96HC4 596 aaKnown RBP8.62□□□□□ -1.03
SNCA-201ENST00000336904 IL17FQ96PD4 163 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 TRAPPC9Q96Q05 1148 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 TRIM15Q9C019 465 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.62□□□□□ -1.03
SNCA-201ENST00000336904 ERVK-11Q9UQG0 969 aa8.62□□□□□ -1.03
SNCA-201ENST00000336904 CLOCKO15516 846 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 LATO43561 262 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 SLC16A8O95907 504 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 LDLRP01130 860 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 IL7RP16871 459 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 SDC1P18827 310 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 MERTKQ12866 999 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 BNIP2Q12982 314 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 CAMK1Q14012 370 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 KIAA0040Q15053 153 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 CACHD1Q5VU97 1274 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 PRMT9Q6P2P2 845 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 SPESP1Q6UW49 350 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 PARS2Q7L3T8 475 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 RAVER1Q8IY67 606 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 MRPL43Q8N983 215 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 NETO1Q8TDF5 533 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 STON2Q8WXE9 905 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 ISG20Q96AZ6 181 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 CENPNQ96H22 339 aaPredicted RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 ZBTB18Q99592 522 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 BARD1Q99728 777 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 SLC32A1Q9H598 525 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 ARMC1Q9NVT9 282 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 C1orf109Q9NX04 203 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 PKD2L2Q9NZM6 624 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 HSFX1Q9UBD0 423 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 BTBD3Q9Y2F9 522 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 TMEM98Q9Y2Y6 226 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 MRPS23Q9Y3D9 190 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 F5P12259 2224 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 AQP12BA6NM10 295 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 C16orf96A6NNT2 1141 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 hCG_2039718K7EN88 272 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 GNGT2O14610 69 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 YY2O15391 372 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 HNRNPRO43390 633 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 MMP20O60882 483 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 ENO2P09104 434 aaPredicted RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 ELFN1P0C7U0 828 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 PABPC4LP0CB38 370 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 BMP2P12643 396 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 RPL5P46777 297 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 RPS14P62263 151 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 IRF8Q02556 426 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 PWP1Q13610 501 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 RBBP5Q15291 538 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 GPR33Q49SQ1 333 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 CATSPEREQ5SY80 951 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 PPP4R4Q6NUP7 873 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 TMEM220Q6QAJ8 160 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 EFL1Q7Z2Z2 1120 aaKnown RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 TMEM179BQ7Z7N9 219 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 TRAPPC5Q8IUR0 188 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 AQP12AQ8IXF9 295 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 REM2Q8IYK8 340 aaPredicted RBP8.61□□□□□ -1.03
SNCA-201ENST00000336904 ANKFN1Q8N957 763 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 TFAP2CQ92754 450 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 KLK6Q92876 244 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 MAL2Q969L2 176 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 AP2M1Q96CW1 435 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 MRGPRX3Q96LB0 322 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 PPP3R2Q96LZ3 170 aa8.61□□□□□ -1.03
SNCA-201ENST00000336904 HEPHQ9BQS7 1158 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms