RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 AGAP14A8MT82 685 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 CLDN9O95484 217 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 HNRNPA1P09651 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
LIMK1-201ENST00000336180 PRR35P0CG20 571 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 ATP6V1B1P15313 513 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 NFKBIAP25963 317 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 DDX6P26196 483 aaKnown RBP eCLIP12.25□□□□□ -0.454e-6■■□□□ 13.2
LIMK1-201ENST00000336180 TIE1P35590 1138 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 ACADVLP49748 655 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 ERAP2Q6P179 960 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 PARM1Q6UWI2 310 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-201ENST00000336180 SYTL1Q8IYJ3 562 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 BTN2A2Q8WVV5 523 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 FIG4Q92562 907 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 FGF14Q92915 247 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 SMARCD2Q92925 531 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 LGR4Q9BXB1 951 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 C1QTNF3Q9BXJ4 246 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 DPY30Q9C005 99 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 ALG2Q9H553 416 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 GULP1Q9UBP9 304 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 TDRKHQ9Y2W6 561 aaKnown RBP12.25□□□□□ -0.45
LIMK1-201ENST00000336180 OR1A2Q9Y585 309 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 MAGED1Q9Y5V3 778 aaPredicted RBP12.25□□□□□ -0.45
LIMK1-201ENST00000336180 CFAP99D6REC4 459 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 LYNP07948 512 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 MAP4P27816 1152 aaKnown RBP12.25□□□□□ -0.45
LIMK1-201ENST00000336180 IRF8Q02556 426 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 CNTN1Q12860 1018 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 DUS1LQ6P1R4 473 aaKnown RBP12.25□□□□□ -0.45
LIMK1-201ENST00000336180 FAM124AQ86V42 546 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 FAM20CQ8IXL6 584 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 FAM86B1Q8N7N1 296 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 FAM129BQ96TA1 746 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 NUSAP1Q9BXS6 441 aaKnown RBP12.25□□□□□ -0.45
LIMK1-201ENST00000336180 SLC32A1Q9H598 525 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 FZD3Q9NPG1 666 aa12.25□□□□□ -0.45
LIMK1-201ENST00000336180 C7orf72A4D263 438 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 PLOD2O00469 737 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 SEC24DO94855 1032 aaPredicted RBP12.24□□□□□ -0.45
LIMK1-201ENST00000336180 GDI1P31150 447 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 LAPTM5Q13571 262 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 GSTA3Q16772 222 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 CATSPEREQ5SY80 951 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 LYPLAL1Q5VWZ2 237 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 CCDC80Q76M96 950 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 CYP2U1Q7Z449 544 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 SPATA19Q7Z5L4 167 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 METTL3Q86U44 580 aaKnown RBP12.24□□□□□ -0.45
LIMK1-201ENST00000336180 LSRQ86X29 649 aaPredicted RBP12.24□□□□□ -0.45
LIMK1-201ENST00000336180 OR10A6Q8NH74 314 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 FBXO30Q8TB52 745 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 MCOLN3Q8TDD5 553 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 GPATCH1Q9BRR8 931 aaKnown RBP12.24□□□□□ -0.45
LIMK1-201ENST00000336180 CENPKQ9BS16 269 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 TRIM54Q9BYV2 358 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 PPIL1Q9Y3C6 166 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 CCL27Q9Y4X3 112 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 SCN8AQ9UQD0 1980 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 MTCL1Q9Y4B5 1905 aaKnown RBP12.24□□□□□ -0.45
LIMK1-201ENST00000336180 PRSS51A0A1B0GVH4 220 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 MID1O15344 667 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 SMNDC1O75940 238 aaKnown RBP eCLIP12.24□□□□□ -0.45
LIMK1-201ENST00000336180 BCKDHAP12694 445 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 IST1P53990 364 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 PHC1P78364 1004 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 PYCR3Q53H96 274 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 GCNT7Q6ZNI0 430 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 TECPR1Q7Z6L1 1165 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 ETFBKMTQ8IXQ9 262 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 TMEM102Q8N9M5 508 aaPredicted RBP12.24□□□□□ -0.45
LIMK1-201ENST00000336180 SUSD6Q92537 303 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 MYADMQ96S97 322 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 GID8Q9NWU2 228 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 GPRC5BQ9NZH0 403 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 SUCOQ9UBS9 1254 aaKnown RBP12.24□□□□□ -0.45
LIMK1-201ENST00000336180 AP4B1Q9Y6B7 739 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 IGLON5A6NGN9 336 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 SLC9A3R1O14745 358 aaPredicted RBP12.24□□□□□ -0.45
LIMK1-201ENST00000336180 AREL1O15033 823 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 RGS14O43566 566 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 ETHE1O95571 254 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 LINGO3P0C6S8 592 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 GJA4P35212 333 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 CDKN2CP42773 168 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 GNPDA1P46926 289 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 PFN3P60673 137 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 PLOD1Q02809 727 aaPredicted RBP12.24□□□□□ -0.45
LIMK1-201ENST00000336180 MED21Q13503 144 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 FAM83HQ6ZRV2 1179 aaPredicted RBP12.24□□□□□ -0.45
LIMK1-201ENST00000336180 TMPRSS11BQ86T26 416 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 ZFAND4Q86XD8 727 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 ZNF740Q8NDX6 193 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 ASZ1Q8WWH4 475 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 OR4K3Q96R72 315 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 PKP4Q99569 1192 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 SLC12A9Q9BXP2 914 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 DYRK4Q9NR20 520 aa12.24□□□□□ -0.45
LIMK1-201ENST00000336180 ZDHHC7Q9NXF8 308 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms