RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PAGE1O75459 146 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 DDNO94850 711 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 BPNT1O95861 308 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 ELK4P28324 431 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 RPS14P62263 151 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 HNRNPA0Q13151 305 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 CRB2Q5IJ48 1285 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 DNAJB7Q7Z6W7 309 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 MFSD8Q8NHS3 518 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 HAS1Q92839 578 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 MRPL9Q9BYD2 267 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 PCDHGB7Q9Y5F8 929 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 SPATA31A1Q5TZJ5 1347 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 C2orf92A0A1B0GVN3 265 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 CLCA1A8K7I4 914 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 K7EPI3 171 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 FOXD2O60548 495 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 CRYZL1O95825 349 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 CD48P09326 243 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF20P17024 532 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 GJA1P17302 382 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 CES1P23141 567 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 GBE1Q04446 702 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 SLC25A52Q3SY17 297 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 LRRC37A5PQ49AS3 106 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF676Q8N7Q3 588 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 SLC35G5Q96KT7 338 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF225Q9UK10 706 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 IFNA2P01563 188 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 HTR2AP28223 471 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 GRIA1P42261 906 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 PPP1R8Q12972 351 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 CELF3Q5SZQ8 465 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 PRPF38BQ5VTL8 546 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 SDHAF4Q5VUM1 108 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 IQCHQ86VS3 1027 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF420Q8TAQ5 688 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 NKD2Q969F2 451 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 ARMC5Q96C12 935 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 MAELQ96JY0 434 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 FCRL2Q96LA5 508 aaPredicted RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 ACO2Q99798 780 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 NUSAP1Q9BXS6 441 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 PPIL3Q9H2H8 161 aaKnown RBP9.62□□□□□ -0.87
COL4A6-201ENST00000334504 TMEM185BQ9H7F4 350 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 CDH7Q9ULB5 785 aa9.62□□□□□ -0.87
COL4A6-201ENST00000334504 OAZ2O95190 189 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 FARS2O95363 451 aaKnown RBP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 TUSC3Q13454 348 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 MOB2Q70IA6 237 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 GALNT11Q8NCW6 608 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 HTATIP2Q9BUP3 242 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 MRPL17Q9NRX2 175 aaKnown RBP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 TNFRSF10DQ9UBN6 386 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 UQCRC1P31930 480 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 SHMT1P34896 483 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 CD97P48960 835 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 RPIAP49247 311 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 SCNN1GP51170 649 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 TLE2Q04725 743 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 CACNG1Q06432 222 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 CES5AQ6NT32 575 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 KIF18BQ86Y91 864 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 CASTOR1Q8WTX7 329 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 ESAMQ96AP7 390 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 FAM84AQ96KN4 292 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 COL21A1Q96P44 957 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 ZNF282Q9UDV7 671 aaPredicted RBP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 HMGXB4Q9UGU5 601 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 MYOCOSA0A1B0GUC4 107 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 DDX6P26196 483 aaKnown RBP eCLIP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 MAGEA6P43360 314 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 BATFQ16520 125 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 KLHL35Q6PF15 583 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 MON1BQ7L1V2 547 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 SSX6Q7RTT6 188 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 VTCN1Q7Z7D3 282 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 C15orf40Q8WUR7 153 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 SGCDQ92629 289 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 KAZALD1Q96I82 304 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 C7orf50Q9BRJ6 194 aaKnown RBP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 B3GNT5Q9BYG0 378 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 WDR6Q9NNW5 1121 aaKnown RBP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 IMP3Q9NV31 184 aaKnown RBP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 CALML5Q9NZT1 146 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 FBXW2Q9UKT8 454 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 CYP3A7-CYP3A51PA0A087WV96 503 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 NKRFO15226 690 aaKnown RBP eCLIP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 PSMD10O75832 226 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 KAT7O95251 611 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 GOT2P00505 430 aaKnown RBP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 CYP3A7P24462 503 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 PTPN9P43378 593 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 KHKP50053 298 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 AIF1P55008 147 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 E2F1Q01094 437 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 CHIT1Q13231 466 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 PABPC1LQ4VXU2 614 aaKnown RBP9.61□□□□□ -0.87
COL4A6-201ENST00000334504 XKR4Q5GH76 650 aa9.61□□□□□ -0.87
COL4A6-201ENST00000334504 HID1Q8IV36 788 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms