RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 CLK1P49759 484 aaKnown RBP23.07■■□□□ 1.28
TSKU-201ENST00000333090 CXCR4P61073 352 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 SYT16Q17RD7 645 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 COLEC12Q5KU26 742 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 ATAD3BQ5T9A4 648 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 CALHM3Q86XJ0 350 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 LYSMD2Q8IV50 215 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 TRIB2Q92519 343 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 CCDC97Q96F63 343 aaPredicted RBP23.07■■□□□ 1.28
TSKU-201ENST00000333090 CPPED1Q9BRF8 314 aaPredicted RBP23.07■■□□□ 1.28
TSKU-201ENST00000333090 DCSTAMPQ9H295 470 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 ZBTB20Q9HC78 741 aaPredicted RBP23.07■■□□□ 1.28
TSKU-201ENST00000333090 OSGIN1Q9UJX0 560 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 PADI3Q9ULW8 664 aa23.07■■□□□ 1.28
TSKU-201ENST00000333090 TAPBPO15533 448 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 SF3B4Q15427 424 aaKnown RBP eCLIP23.06■■□□□ 1.28
TSKU-201ENST00000333090 OR2T5Q6IEZ7 315 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 POC5Q8NA72 575 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 ATAD1Q8NBU5 361 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 OR2T29Q8NH02 315 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 CTRCQ99895 268 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 INPP5KQ9BT40 448 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 CPNE5Q9HCH3 593 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 THG1LQ9NWX6 298 aaKnown RBP23.06■■□□□ 1.28
TSKU-201ENST00000333090 SLC45A1Q9Y2W3 748 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 DHRS7Q9Y394 339 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 hCG_2039718K7EN88 272 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 TLR5O60602 858 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 DLGAP3O95886 979 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 KRT20P35900 424 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 NKX2-5P52952 324 aaPredicted RBP23.06■■□□□ 1.28
TSKU-201ENST00000333090 KDM4DQ6B0I6 523 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 GDF6Q6KF10 455 aaPredicted RBP23.06■■□□□ 1.28
TSKU-201ENST00000333090 PRSS48Q7RTY5 328 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 SAPCD2Q86UD0 394 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 AKAP14Q86UN6 197 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 UPF1Q92900 1129 aaKnown RBP eCLIP23.06■■□□□ 1.287e-8■■■■■ 51.7
TSKU-201ENST00000333090 EHD1Q9H4M9 534 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 PDP1Q9P0J1 537 aaPredicted RBP23.06■■□□□ 1.28
TSKU-201ENST00000333090 AP3M1Q9Y2T2 418 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 RAI2Q9Y5P3 530 aa23.06■■□□□ 1.28
TSKU-201ENST00000333090 F5H5T6 163 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 SLC28A1O00337 649 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 GZMMP51124 257 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 MAD2L1BPQ15013 274 aaPredicted RBP23.05■■□□□ 1.28
TSKU-201ENST00000333090 GNASQ5JWF2 1037 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 SNX20Q7Z614 316 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 C6orf62Q9GZU0 229 aaPredicted RBP23.05■■□□□ 1.28
TSKU-201ENST00000333090 PRDM8Q9NQV8 689 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.05■■□□□ 1.28
TSKU-201ENST00000333090 ARIH1Q9Y4X5 557 aaPredicted RBP23.05■■□□□ 1.28
TSKU-201ENST00000333090 ANKRD66B4E2M5 251 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 ERN1O75460 977 aaKnown RBP23.05■■□□□ 1.28
TSKU-201ENST00000333090 BCKDHAP12694 445 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 MAGP20916 626 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 TGFBR2P37173 567 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 MAGEA2P43356 314 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 KCNQ1P51787 676 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 HNRNPFP52597 415 aaKnown RBP23.05■■□□□ 1.28
TSKU-201ENST00000333090 MVKQ03426 396 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 TAF10Q12962 218 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 PLEKHG6Q3KR16 790 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 C6orf183Q5T699 404 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 GALNT10Q86SR1 603 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 TMEM132CQ8N3T6 1108 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 CIPCQ9C0C6 399 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 SP140LQ9H930 580 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 CCNB1IP1Q9NPC3 277 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 WWOXQ9NZC7 414 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 KIF17Q9P2E2 1029 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 OPTCQ9UBM4 332 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 PCDHB8Q9UN66 801 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 HSPE1-MOB4S4R3N1 261 aa23.05■■□□□ 1.28
TSKU-201ENST00000333090 NUP214P35658 2090 aaPredicted RBP23.05■■□□□ 1.28
TSKU-201ENST00000333090 TDRD15B5MCY1 1934 aaKnown RBP23.04■■□□□ 1.28
TSKU-201ENST00000333090 CYP2U1Q7Z449 544 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 PLPP6Q8IY26 295 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 C8orf48Q96LL4 319 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 RMI1Q9H9A7 625 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 SERHLQ9NQF3 203 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 SNPHO15079 494 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 ZNF623O75123 536 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 IL1RNP18510 177 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 CDC20Q12834 499 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 ZNF404Q494X3 552 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 STEAP3Q658P3 488 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 PTRHD1Q6GMV3 140 aaKnown RBP23.04■■□□□ 1.28
TSKU-201ENST00000333090 ULK4Q96C45 1275 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 PARVBQ9HBI1 364 aa23.04■■□□□ 1.28
TSKU-201ENST00000333090 AGO1Q9UL18 857 aaKnown RBP23.04■■□□□ 1.28
TSKU-201ENST00000333090 MKI67P46013 3256 aaKnown RBP23.04■■□□□ 1.28
TSKU-201ENST00000333090 OR2A25A4D2G3 310 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 CDKN2CP42773 168 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 USP39Q53GS9 565 aaKnown RBP23.03■■□□□ 1.28
TSKU-201ENST00000333090 ATG16L2Q8NAA4 619 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 PDLIM5Q96HC4 596 aaKnown RBP23.03■■□□□ 1.28
TSKU-201ENST00000333090 ADAM2Q99965 735 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 GABARAPL1Q9H0R8 117 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 MIR1-1HGQ9H1L0 117 aa23.03■■□□□ 1.28
TSKU-201ENST00000333090 P2RY12Q9H244 342 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms