RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 APCDD1Q8J025 514 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 C12orf76Q8N812 135 aaPredicted RBP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 SCAMP4Q969E2 229 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 SPRTNQ9H040 489 aaPredicted RBP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 ECM29Q5VYK3 1845 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 PI15O43692 258 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 IFNW1P05000 195 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 ENGP17813 658 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 DDX6P26196 483 aaKnown RBP eCLIP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 CCNFP41002 786 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 ZBTB6Q15916 424 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 RABL3Q5HYI8 236 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 FRG2Q64ET8 278 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 GALNT18Q6P9A2 607 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 SORCS1Q8WY21 1168 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 RIPOR3Q96MK2 946 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 FRG2BQ96QU4 278 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 TAC3Q9UHF0 121 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 MANBAO00462 879 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 LEFTY1O75610 366 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 OPN1SWP03999 348 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 CD1DP15813 335 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 ETV3P41162 512 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 MADCAM1Q13477 382 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 BLMHQ13867 455 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 Q6ZVL8 140 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 FAM98AQ8NCA5 519 aaKnown RBP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 ENKURQ8TC29 256 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 HMGB4Q8WW32 186 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 TRMT61BQ9BVS5 477 aaKnown RBP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 STMN3Q9NZ72 180 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 LRRC72A6NJI9 287 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 POP7O75817 140 aaKnown RBP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 RAP2AP10114 183 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 VARSP26640 1264 aaKnown RBP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 LEPRP48357 1165 aaKnown RBP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 GSCP56915 257 aaPredicted RBP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 ILF3Q12906 894 aaKnown RBP eCLIP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 SLC9A5Q14940 896 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 PCBP2Q15366 365 aaKnown RBP eCLIP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 LIN52Q52LA3 116 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 OVCA2Q8WZ82 227 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 IFT80Q9P2H3 777 aaPredicted RBP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 OAZ3Q9UMX2 235 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 RFPL2O75678 378 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 S1PR4O95977 384 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 ITPKBP27987 946 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 SLC7A1P30825 629 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 COL9A2Q14055 689 aaPredicted RBP12.72□□□□□ -0.37
VSTM4-202ENST00000332853 HEPACAMQ14CZ8 416 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 TECRLQ5HYJ1 363 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 TMEM135Q86UB9 458 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 BPIFB1Q8TDL5 484 aa12.72□□□□□ -0.37
VSTM4-202ENST00000332853 PDPK1O15530 556 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 SLC25A12O75746 678 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 RHOP08100 348 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 TRAP1Q12931 704 aaKnown RBP12.71□□□□□ -0.37
VSTM4-202ENST00000332853 DCST1Q5T197 706 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 NEK10Q6ZWH5 1172 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 TTC29Q8NA56 475 aaPredicted RBP12.71□□□□□ -0.37
VSTM4-202ENST00000332853 TP53INP1Q96A56 240 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 CAPGP40121 348 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 PLEKHG6Q3KR16 790 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 PRAMEF14Q5SWL7 426 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 PRAMEF13Q5VWM6 474 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 SLCO6A1Q86UG4 719 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 KAT2AQ92830 837 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 IRF7Q92985 503 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 CGREF1Q99674 301 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 FZD4Q9ULV1 537 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 MRPS7Q9Y2R9 242 aaKnown RBP12.71□□□□□ -0.37
VSTM4-202ENST00000332853 TEX28O15482 410 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 SLC35G6P0C7Q6 338 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 DIO3P55073 304 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 NFATC2Q13469 925 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 LRRC32Q14392 662 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 SEMA3AQ14563 771 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 SNAPC1Q16533 368 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 ZNF544Q6NX49 715 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 BEND5Q7L4P6 421 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 LRRC70Q7Z2Q7 622 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 MRPL10Q7Z7H8 261 aaKnown RBP12.71□□□□□ -0.37
VSTM4-202ENST00000332853 SCD5Q86SK9 330 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 CADM2Q8N3J6 435 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 CD244Q9BZW8 370 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 LMAN2LQ9H0V9 348 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 SQORQ9Y6N5 450 aa12.71□□□□□ -0.37
VSTM4-202ENST00000332853 A0A1W2PRB8 838 aa12.71□□□□□ -0.38
VSTM4-202ENST00000332853 LDB2O43679 373 aa12.71□□□□□ -0.38
VSTM4-202ENST00000332853 SCN2BO60939 215 aa12.71□□□□□ -0.38
VSTM4-202ENST00000332853 NADKO95544 446 aaPredicted RBP12.71□□□□□ -0.38
VSTM4-202ENST00000332853 CCR3P51677 355 aa12.71□□□□□ -0.38
VSTM4-202ENST00000332853 NCBP2P52298 156 aaKnown RBP eCLIP12.71□□□□□ -0.38
VSTM4-202ENST00000332853 MEF2AQ02078 507 aaPredicted RBP12.71□□□□□ -0.38
VSTM4-202ENST00000332853 GRB7Q14451 532 aa12.71□□□□□ -0.38
VSTM4-202ENST00000332853 FAM171BQ6P995 826 aa12.71□□□□□ -0.38
VSTM4-202ENST00000332853 ADGRG2Q8IZP9 1017 aa12.71□□□□□ -0.38
VSTM4-202ENST00000332853 ZMIZ2Q8NF64 920 aa12.71□□□□□ -0.38
VSTM4-202ENST00000332853 PSKH2Q96QS6 385 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms