RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 IRF4Q15306 451 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 TLR1Q15399 786 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 FAM217AQ8IXS0 508 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 OR4E2Q8NGC2 313 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 NUDT8Q8WV74 236 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 DGCR14Q96DF8 476 aaKnown RBP15.49■□□□□ 0.07
PDGFB-201ENST00000331163 MRGPRX1Q96LB2 322 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 NPAS2Q99743 824 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 YIPF2Q9BWQ6 316 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 MARK1Q9P0L2 795 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 POMPQ9Y244 141 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 SLC27A6Q9Y2P4 619 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 H3BSA7 217 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 K7EQS6 105 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 ULK1O75385 1050 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 SLC16A8O95907 504 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 CYLC2Q14093 348 aaPredicted RBP15.49■□□□□ 0.07
PDGFB-201ENST00000331163 EOGTQ5NDL2 527 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 PRR23BQ6ZRT6 265 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 FAM156AQ8NDB6 213 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 OR5AR1Q8NGP9 310 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 APOLD1Q96LR9 279 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 RHBGQ9H310 441 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 PRDM8Q9NQV8 689 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 FARSBQ9NSD9 589 aaKnown RBP15.49■□□□□ 0.07
PDGFB-201ENST00000331163 TANC1Q9C0D5 1861 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 PTPRDP23468 1912 aa15.49■□□□□ 0.07
PDGFB-201ENST00000331163 TPST1O60507 370 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 PABPC4LP0CB38 370 aaKnown RBP15.48■□□□□ 0.07
PDGFB-201ENST00000331163 C5AR1P21730 350 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 LDLRAP1Q5SW96 308 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 CYS1Q717R9 158 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 CCL4L1Q8NHW4 92 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 SLC39A3Q9BRY0 314 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 SEMA6AQ9H2E6 1030 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 FADS3Q9Y5Q0 445 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 FAM186AA6NE01 2351 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 A0A1B0GTW7 788 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 CAPN14A8MX76 684 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 TGDSO95455 350 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 SEMA4FO95754 770 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 COL6A2P12110 1019 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 FUT4P22083 530 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 TPMTP51580 245 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 FAM129CQ86XR2 697 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 SLC44A2Q8IWA5 706 aaPredicted RBP15.48■□□□□ 0.07
PDGFB-201ENST00000331163 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.48■□□□□ 0.07
PDGFB-201ENST00000331163 KIAA1191Q96A73 305 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 SIKE1Q9BRV8 207 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 CCM2Q9BSQ5 444 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 C6orf106Q9H6K1 298 aaPredicted RBP15.48■□□□□ 0.07
PDGFB-201ENST00000331163 ZNF490Q9ULM2 529 aaPredicted RBP15.48■□□□□ 0.07
PDGFB-201ENST00000331163 KERAO60938 352 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 CFIP05156 583 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 PCSK6P29122 969 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 HERVK_113P63132 956 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 OR4F6Q8NGB9 312 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 ERVK-6Q9BXR3 956 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 TNFRSF12AQ9NP84 129 aa15.48■□□□□ 0.07
PDGFB-201ENST00000331163 POLR3HQ9Y535 204 aaPredicted RBP15.48■□□□□ 0.07
PDGFB-201ENST00000331163 TSC2P49815 1807 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 BOLA2-SMG1P6H3BVE0 249 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 ANGPT2O15123 496 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 HTR6P50406 440 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 RPS14P62263 151 aaKnown RBP15.47■□□□□ 0.07
PDGFB-201ENST00000331163 RPS21P63220 83 aaKnown RBP15.47■□□□□ 0.07
PDGFB-201ENST00000331163 FASTKQ14296 549 aaKnown RBP15.47■□□□□ 0.07
PDGFB-201ENST00000331163 ATP6AP1LQ52LC2 224 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 UNC50Q53HI1 259 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 LRRTM4Q86VH4 590 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 ANKRD46Q86W74 232 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 RALGPS2Q86X27 583 aaPredicted RBP15.47■□□□□ 0.07
PDGFB-201ENST00000331163 TMEM145Q8NBT3 493 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 ZFP28Q8NHY6 868 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 PATE1Q8WXA2 126 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 RETREG1Q9H6L5 497 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 SPATA6Q9NWH7 488 aaPredicted RBP15.47■□□□□ 0.07
PDGFB-201ENST00000331163 SH3BP4Q9P0V3 963 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 DYRK1BQ9Y463 629 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 AP4B1Q9Y6B7 739 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 LAMA1P25391 3075 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 TRPC5OSA6NMA1 111 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 ALDH4A1P30038 563 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 CCR3P51677 355 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 HPCAP84074 193 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 B4GALNT1Q00973 533 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 FRMD7Q6ZUT3 714 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 VPS33AQ96AX1 596 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 C19orf60Q96EN9 201 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 CCDC106Q9BWC9 280 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 TAC3Q9UHF0 121 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 MRPS17Q9Y2R5 130 aaKnown RBP15.47■□□□□ 0.07
PDGFB-201ENST00000331163 MYO15AQ9UKN7 3530 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 A0A0J9YVX5 310 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 ZSCAN9O15535 394 aaPredicted RBP15.47■□□□□ 0.07
PDGFB-201ENST00000331163 ADH1BP00325 375 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 GSNP06396 782 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 SERPINA6P08185 405 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 TFPTP0C1Z6 253 aa15.47■□□□□ 0.07
PDGFB-201ENST00000331163 DRD1P21728 446 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms