RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 RIMKLBQ9ULI2 386 aa14.12□□□□□ -0.15
SNX20-202ENST00000330943 CCL27Q9Y4X3 112 aa14.12□□□□□ -0.15
SNX20-202ENST00000330943 ANKRD34BA5PLL1 514 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 RGS14O43566 566 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 SEC22BO75396 215 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 CCNKO75909 580 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 GADD45AP24522 165 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 MC4RP32245 332 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 HSPA7P48741 367 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 PRSS36Q5K4E3 855 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 CACHD1Q5VU97 1274 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 ATG9BQ674R7 924 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 OR2T5Q6IEZ7 315 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 CCBE1Q6UXH8 406 aaPredicted RBP14.11□□□□□ -0.15
SNX20-202ENST00000330943 SPATC1Q76KD6 591 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 TAS2R42Q7RTR8 314 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 ANKRD46Q86W74 232 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 MIB1Q86YT6 1006 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 OR2T29Q8NH02 315 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 TRIB3Q96RU7 358 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 YME1L1Q96TA2 773 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 ABHD16BQ9H3Z7 469 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 BPIFA1Q9NP55 256 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 PDP1Q9P0J1 537 aaPredicted RBP14.11□□□□□ -0.15
SNX20-202ENST00000330943 UGT2A1Q9Y4X1 527 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 PER2O15055 1255 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 GPR39O43194 453 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 PPP3CCP48454 512 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 TUBA1BP68363 451 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 TUBA3EQ6PEY2 450 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 SUSD1Q6UWL2 747 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 TUBA1AQ71U36 451 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 SNX20Q7Z614 316 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 GALNT10Q86SR1 603 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 METTL4Q8N3J2 472 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 ATG16L2Q8NAA4 619 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 GABARAPL1Q9H0R8 117 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 NSUN3Q9H649 340 aaKnown RBP14.11□□□□□ -0.15
SNX20-202ENST00000330943 MARCH7Q9H992 704 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 NDRG4Q9ULP0 352 aaKnown RBP14.11□□□□□ -0.15
SNX20-202ENST00000330943 ERVW-1Q9UQF0 538 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 PRAMEF11O60813 436 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 CELF2O95319 508 aaKnown RBP14.11□□□□□ -0.15
SNX20-202ENST00000330943 TBX18O95935 607 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 B3GALT4O96024 378 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 HOXA9P31269 272 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 RPL9P32969 192 aaKnown RBP14.11□□□□□ -0.15
SNX20-202ENST00000330943 S100A5P33763 92 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 PSEN2P49810 448 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 CREMQ03060 361 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 PCBP2Q15366 365 aaKnown RBP eCLIP14.11□□□□□ -0.15
SNX20-202ENST00000330943 PARP15Q460N3 678 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 AGMOQ6ZNB7 445 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 CALHM3Q86XJ0 350 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 CCDC71Q8IV32 467 aaPredicted RBP14.11□□□□□ -0.15
SNX20-202ENST00000330943 PARP16Q8N5Y8 322 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 CELF2-AS1Q8N7Q2 184 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 GLB1L3Q8NCI6 653 aaPredicted RBP14.11□□□□□ -0.15
SNX20-202ENST00000330943 MS4A4AQ96JQ5 239 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 B3GALT6Q96L58 329 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 CPPED1Q9BRF8 314 aaPredicted RBP14.11□□□□□ -0.15
SNX20-202ENST00000330943 CLMPQ9H6B4 373 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 PARVBQ9HBI1 364 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 KRT84Q9NSB2 600 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 RNF6Q9Y252 685 aa14.11□□□□□ -0.15
SNX20-202ENST00000330943 TNPO3Q9Y5L0 923 aaKnown RBP14.11□□□□□ -0.15
SNX20-202ENST00000330943 TRBV5-3A0A0A0MS03 114 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 LOC100506127A0A0U1RQW1 187 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 C2orf81A6NN90 581 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 AREL1O15033 823 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 IDH3BO43837 385 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 WBP4O75554 376 aaKnown RBP14.1□□□□□ -0.15
SNX20-202ENST00000330943 KRT8P05787 483 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 BMP1P13497 986 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 MAGEA2P43356 314 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 TTPAP49638 278 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 PNCKQ6P2M8 343 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 TSPYL5Q86VY4 417 aaPredicted RBP14.1□□□□□ -0.15
SNX20-202ENST00000330943 HORMAD1Q86X24 394 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 GALNT13Q8IUC8 556 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 LILRB4Q8NHJ6 448 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 ELMO1Q92556 727 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 TINF2Q9BSI4 451 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 EMILIN2Q9BXX0 1053 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 ABI2Q9NYB9 513 aaPredicted RBP14.1□□□□□ -0.15
SNX20-202ENST00000330943 FLRT1Q9NZU1 646 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 VPS9D1Q9Y2B5 631 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 IGLV3-10A0A075B6K4 115 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 A0A0U1RQS6 177 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 RGS13O14921 159 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 PCDHGA12O60330 932 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 GDF5P43026 501 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 CTSKP43235 329 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 MAD2L1Q13257 205 aaPredicted RBP14.1□□□□□ -0.15
SNX20-202ENST00000330943 TAF1AQ15573 450 aaPredicted RBP14.1□□□□□ -0.15
SNX20-202ENST00000330943 UBE2UQ5VVX9 321 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 KIAA1614Q5VZ46 1190 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 ZNF467Q7Z7K2 595 aaPredicted RBP14.1□□□□□ -0.15
SNX20-202ENST00000330943 AMER2Q8N7J2 671 aa14.1□□□□□ -0.15
SNX20-202ENST00000330943 EFHBQ8N7U6 833 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms