RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 MKRN2Q9H000 416 aaKnown RBP16.49■□□□□ 0.23
DDX41-201ENST00000330503 PCDHAC1Q9H158 963 aa16.49■□□□□ 0.23
DDX41-201ENST00000330503 CCDC154A6NI56 674 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 ADAM23O75077 832 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 SEC22BO75396 215 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 EGFP01133 1207 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 CD22P20273 847 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 ACADLP28330 430 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 NTSR1P30989 418 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 CTHP32929 405 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 CAPRIN1Q14444 709 aaKnown RBP16.48■□□□□ 0.23
DDX41-201ENST00000330503 NFE2L1Q14494 772 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 PLA2G4EQ3MJ16 856 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 HABP4Q5JVS0 413 aaKnown RBP16.48■□□□□ 0.23
DDX41-201ENST00000330503 ZNF776Q68DI1 518 aaPredicted RBP16.48■□□□□ 0.23
DDX41-201ENST00000330503 HOMEZQ8IX15 550 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 SLC15A3Q8IY34 581 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 PPFIBP2Q8ND30 876 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 SELENOMQ8WWX9 145 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 GABRG3Q99928 467 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 SLC6A17Q9H1V8 727 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 MRPL40Q9NQ50 206 aaKnown RBP16.48■□□□□ 0.23
DDX41-201ENST00000330503 GID8Q9NWU2 228 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 NMRK1Q9NWW6 199 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 SUCOQ9UBS9 1254 aaKnown RBP16.48■□□□□ 0.23
DDX41-201ENST00000330503 SLC23A2Q9UGH3 650 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 SNX6Q9UNH7 406 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 UNC80Q8N2C7 3258 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 DOCK9Q9BZ29 2069 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 MGAT4DA6NG13 374 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 NME4O00746 187 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 RNASEH2AO75792 299 aaKnown RBP16.48■□□□□ 0.23
DDX41-201ENST00000330503 HALP42357 657 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 ATXN3P54252 364 aaPredicted RBP16.48■□□□□ 0.23
DDX41-201ENST00000330503 CDK3Q00526 305 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 PRKG2Q13237 762 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 IMPG1Q17R60 797 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 SAMD4BQ5PRF9 694 aaKnown RBP16.48■□□□□ 0.23
DDX41-201ENST00000330503 ICE2Q659A1 982 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 DOK6Q6PKX4 331 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 IL17RCQ8NAC3 791 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 BHLHE22Q8NFJ8 381 aaPredicted RBP16.48■□□□□ 0.23
DDX41-201ENST00000330503 HM13Q8TCT9 377 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 ASB9Q96DX5 294 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 C1orf109Q9NX04 203 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 CMTM6Q9NX76 183 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 ASIC5Q9NY37 505 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 SLAMF8Q9P0V8 285 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 ABCD2Q9UBJ2 740 aa16.48■□□□□ 0.23
DDX41-201ENST00000330503 EIF3LQ9Y262 564 aaKnown RBP16.48■□□□□ 0.23
DDX41-201ENST00000330503 A0A1W2PQF6 199 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 SERTM1A2A2V5 107 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 NVLO15381 856 aaKnown RBP16.47■□□□□ 0.23
DDX41-201ENST00000330503 JUPP14923 745 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 COL9A1P20849 921 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 SLC6A2P23975 617 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 PCDH1Q08174 1060 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 ADGRE1Q14246 886 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 TIGD2Q4W5G0 525 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 PRMT9Q6P2P2 845 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 KLK6Q92876 244 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 NECTIN4Q96NY8 510 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 TEX101Q9BY14 249 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 ZDHHC5Q9C0B5 715 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 OR52A5Q9H2C5 316 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 ELOVL6Q9H5J4 265 aa16.47■□□□□ 0.23
DDX41-201ENST00000330503 LEF1Q9UJU2 399 aaPredicted RBP16.47■□□□□ 0.23
DDX41-201ENST00000330503 PAK4O96013 591 aaPredicted RBP16.46■□□□□ 0.23
DDX41-201ENST00000330503 JAK1P23458 1154 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 IRF8Q02556 426 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 TRAP1Q12931 704 aaKnown RBP16.46■□□□□ 0.23
DDX41-201ENST00000330503 MAD2L1Q13257 205 aaPredicted RBP16.46■□□□□ 0.23
DDX41-201ENST00000330503 INPP5AQ14642 412 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 PTGR1Q14914 329 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 PON2Q15165 354 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 LIPJQ5W064 366 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 TLDC1Q6P9B6 456 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 SUSD1Q6UWL2 747 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 TRMT11Q7Z4G4 463 aaKnown RBP16.46■□□□□ 0.23
DDX41-201ENST00000330503 LIX1Q8N485 282 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 RNF175Q8N4F7 328 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 ZNF480Q8WV37 535 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 FAM131CQ96AQ9 280 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 MED8Q96G25 268 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 ZNF570Q96NI8 536 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 DPEP2Q9H4A9 486 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 FBXL12Q9NXK8 326 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 PCDHA9Q9Y5H5 950 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 E7EQ34 232 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 UGDHO60701 494 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 BCKDHAP12694 445 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 PRPH2P23942 346 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 DGKQP52824 942 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 PLOD1Q02809 727 aaPredicted RBP16.46■□□□□ 0.23
DDX41-201ENST00000330503 FOXM1Q08050 763 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 NFYCQ13952 458 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 DOC2AQ14183 400 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 USP39Q53GS9 565 aaKnown RBP16.46■□□□□ 0.23
DDX41-201ENST00000330503 XKR6Q5GH73 641 aa16.46■□□□□ 0.23
DDX41-201ENST00000330503 C6orf10Q5SRN2 563 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms