RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 OR2AG1Q9H205 316 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 SAR1AQ9NR31 198 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 PADI4Q9UM07 663 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 STK38LQ9Y2H1 464 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 MSRB2Q9Y3D2 182 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 UNC13CQ8NB66 2214 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 ITM2AO43736 263 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 AKT1P31749 480 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 GMPRP36959 345 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 ALDH18A1P54886 795 aaKnown RBP16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 CAMK2BQ13554 666 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 CES4AQ5XG92 561 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 GKN2Q86XP6 184 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 GPSM1Q86YR5 675 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 SPATA6LQ8N4H0 392 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 GPR156Q8NFN8 814 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 EEF1AKMT1Q8WVE0 214 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 C20orf27Q9GZN8 174 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 RDH14Q9HBH5 336 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 TRNAU1APQ9NX07 287 aaKnown RBP16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 NUDT4Q9NZJ9 180 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 TAAR2Q9P1P5 351 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 SLC23A2Q9UGH3 650 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 ZNHIT2Q9UHR6 403 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 DCTN4Q9UJW0 460 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 DOLKQ9UPQ8 538 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 NEUROG3Q9Y4Z2 214 aa16.03■□□□□ 0.16
PDLIM1-201ENST00000329399 ACACAQ13085 2346 aa16.02■□□□□ 0.16
PDLIM1-201ENST00000329399 TRPC5OSA6NMA1 111 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 B4DGG1 531 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 BTN3A1O00481 513 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 SLC16A5O15375 505 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 HDAC3O15379 428 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 S100BP04271 92 aaPredicted RBP16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 ENO2P09104 434 aaPredicted RBP16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 MPC1LP0DKB6 136 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 RASSF2P50749 326 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 AQP5P55064 265 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 PLOD1Q02809 727 aaPredicted RBP16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 NR0B2Q15466 257 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 GALNTL6Q49A17 601 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 ARL13AQ5H913 290 aaPredicted RBP16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 ZNF678Q5SXM1 525 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 HES3Q5TGS1 186 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 NAPRTQ6XQN6 538 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 FRMD7Q6ZUT3 714 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 FBXO39Q8N4B4 442 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 CCNYL1Q8N7R7 359 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 RFWD2Q8NHY2 731 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 DPEP2Q9H4A9 486 aa16.02■□□□□ 0.15
PDLIM1-201ENST00000329399 TRBV23OR9-2A0A075B6M9 112 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 KLHL33A6NCF5 533 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 MATN2O00339 956 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 NUAK1O60285 661 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 SNX2O60749 519 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 CAPNS1P04632 268 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 MTHFD2P13995 350 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 GFAPP14136 432 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 AOAHP28039 575 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 MAZP56270 477 aaKnown RBP16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 TARDBPQ13148 414 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 SP140Q13342 867 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 GBX1Q14549 363 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 OR4D1Q15615 310 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 ANKS6Q68DC2 871 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 CHST15Q7LFX5 561 aaPredicted RBP16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 ZNF547Q8IVP9 402 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 CPNE9Q8IYJ1 553 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 FITM2Q8N6M3 262 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 ARL10Q8N8L6 244 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 GIMAP7Q8NHV1 300 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 ASZ1Q8WWH4 475 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 RMDN2Q96LZ7 410 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 OR2M4Q96R27 311 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 TRIM39Q9HCM9 518 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 SARS2Q9NP81 518 aaKnown RBP16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 PFDN4Q9NQP4 134 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 TXLNGQ9NUQ3 528 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 HEY2Q9UBP5 337 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 TRIM33Q9UPN9 1127 aa16.01■□□□□ 0.15
PDLIM1-201ENST00000329399 GOLGA8QA0A0J9YX86 632 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 GOLGA8OA6NCC3 632 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 GPR89AB7ZAQ6 455 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 GOLGA8NF8WBI6 632 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 VEGFDO43915 354 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 LYPLA1O75608 230 aaPredicted RBP16■□□□□ 0.15
PDLIM1-201ENST00000329399 MLYCDO95822 493 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 C8GP07360 202 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 SERPINA6P08185 405 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 FGF4P08620 206 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 GPR89BP0CG08 455 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 PGGT1BP53609 377 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 IRX1P78414 480 aaPredicted RBP16■□□□□ 0.15
PDLIM1-201ENST00000329399 CDKL1Q00532 357 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 B4GALNT1Q00973 533 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 CDC16Q13042 620 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 ILKQ13418 452 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 FRA10AC1Q70Z53 315 aa16■□□□□ 0.15
PDLIM1-201ENST00000329399 C17orf82Q86X59 251 aaPredicted RBP16■□□□□ 0.15
PDLIM1-201ENST00000329399 NAGSQ8N159 534 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms