RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 LRRC66Q68CR7 880 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 OR4F3Q6IEY1 312 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 ANKRD26P1Q6NSI1 321 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 CROCCP3Q8IVE0 287 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 ACDQ96AP0 544 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 ZNF558Q96NG5 402 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 MBOAT4Q96T53 435 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 COPS8Q99627 209 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 OSBPL10Q9BXB5 764 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 YTHDF1Q9BYJ9 559 aaKnown RBP13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 GPRC5BQ9NZH0 403 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 LMCD1Q9NZU5 365 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 VPS4AQ9UN37 437 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 OR51B4Q9Y5P0 310 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 ST14Q9Y5Y6 855 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 BACE2Q9Y5Z0 518 aa13.71□□□□□ -0.22
ATP2C1-201ENST00000328560 SH3PXD2BA1X283 911 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 ABCB7O75027 752 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 SCELO95171 688 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 CPSF4O95639 269 aaKnown RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 HIST1H2AGP0C0S8 130 aaPredicted RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 HIST1H2ADP20671 130 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 CD70P32970 193 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 DCTP40126 519 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 SF1Q15637 639 aaKnown RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 DGKKQ5KSL6 1271 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 CCDC81Q6ZN84 652 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 SPARTQ8N0X7 666 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 CHDHQ8NE62 594 aaPredicted RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 OR13F1Q8NGS4 319 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 HIST1H2AHQ96KK5 128 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 CEP295NLQ96MC4 621 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 HIST1H2AJQ99878 128 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 MYOCQ99972 504 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 RBM4BQ9BQ04 359 aaKnown RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 H2AFJQ9BTM1 129 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 RBM4Q9BWF3 364 aaKnown RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 SMG9Q9H0W8 520 aaKnown RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 CLMPQ9H6B4 373 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 ZNF334Q9HCZ1 680 aaPredicted RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 MBD1Q9UIS9 605 aaPredicted RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 SLC22A14Q9Y267 594 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 PIKFYVEQ9Y2I7 2098 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 LOC100130705A0A1B0GUX0 176 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 hCG_2039718K7EN88 272 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 ZNF701M0R085 212 aaPredicted RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 RFXANKO14593 260 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 PER2O15055 1255 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 SERPINA4P29622 427 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 CCR7P32248 378 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 PLA2G16P53816 162 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 PTCHD3Q3KNS1 767 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 TPGS2Q68CL5 300 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 ZCCHC8Q6NZY4 707 aaKnown RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 REM2Q8IYK8 340 aaPredicted RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 HS6ST3Q8IZP7 471 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 TMEM132CQ8N3T6 1108 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 GLB1L3Q8NCI6 653 aaPredicted RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 MRPS31Q92665 395 aaKnown RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 KAT8Q9H7Z6 458 aaKnown RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 CFAP97Q9P2B7 532 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 C3orf18Q9UK00 162 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 BAG5Q9UL15 447 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 GRXCR2A6NFK2 248 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 FKBP9O95302 570 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 IGSF6O95976 241 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 ALDH4A1P30038 563 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 BMXP51813 675 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 LMAN2Q12907 356 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 USP39Q53GS9 565 aaKnown RBP13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 GRAMD4Q6IC98 578 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 ZNF621Q6ZSS3 439 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 FKBP9P1Q75LS8 142 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 BBS7Q8IWZ6 715 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 ARL10Q8N8L6 244 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 DDHD1Q8NEL9 900 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 MYLIPQ8WY64 445 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 APIPQ96GX9 242 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 HTATIP2Q9BUP3 242 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 ZDHHC6Q9H6R6 413 aa13.7□□□□□ -0.22
ATP2C1-201ENST00000328560 TANC1Q9C0D5 1861 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 RPS3P23396 243 aaKnown RBP eCLIP13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 FMO3P31513 532 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 GSSP48637 474 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 XAF1Q6GPH4 301 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 CRTC1Q6UUV9 634 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 ALG14Q96F25 216 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 BARD1Q99728 777 aaKnown RBP13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 RNF208Q9H0X6 261 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 SLC32A1Q9H598 525 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 KCTD5Q9NXV2 234 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 TOR1BO14657 336 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 INMTO95050 263 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 GNRH1P01148 92 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 UGT2B4P06133 528 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 GABRR2P28476 465 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 DHRS4L2Q6PKH6 230 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 CRTC3Q6UUV7 619 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 TRIM46Q7Z4K8 759 aa13.69□□□□□ -0.22
ATP2C1-201ENST00000328560 ZDHHC21Q8IVQ6 265 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms