RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 CSHL1Q14406 222 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 NFE2L1Q14494 772 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TMEM164Q5U3C3 297 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TRIM74Q86UV6 250 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 ZNF547Q8IVP9 402 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 LMNTD1Q8N9Z9 388 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SIDT2Q8NBJ9 832 aaKnown RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TRPV3Q8NET8 790 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 FAM76AQ8TAV0 307 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SLC37A2Q8TED4 501 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 APOLD1Q96LR9 279 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 INSM2Q96T92 566 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SGPP1Q9BX95 441 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 EPB41L4BQ9H329 900 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SLC40A1Q9NP59 571 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PCMTD2Q9NV79 361 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 POMT2Q9UKY4 750 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SNX6Q9UNH7 406 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 BTRCQ9Y297 605 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 V9GYY5 206 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SPACA6W5XKT8 324 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 ATXN2Q99700 1313 aaKnown RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 EML5Q05BV3 1969 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 CCDC187A0A096LP49 1063 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 LNP1A1A4G5 178 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 CXorf49A8MYA2 514 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 CAPN5O15484 640 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 CRCPO75575 148 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 ZBTB11O95625 1053 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SERPINE1P05121 402 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 MAOBP27338 520 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 RPL3P39023 403 aaKnown RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PPM1FP49593 454 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PPP2R2AP63151 447 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 MAD2L1Q13257 205 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PTPRCAPQ14761 206 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TMEM35AQ53FP2 167 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 RBM20Q5T481 1227 aaKnown RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PIM3Q86V86 326 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 NRROSQ86YC3 692 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SYTL1Q8IYJ3 562 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 DEFB119Q8N690 84 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 BANPQ8N9N5 519 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 KYQ8NBH2 561 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 CAMKVQ8NCB2 501 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 IFI44Q8TCB0 444 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 DYDC1Q8WWB3 177 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 N4BP2L2Q92802 583 aaPredicted RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 WDR34Q96EX3 536 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 MVB12AQ96EY5 273 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PTCD3Q96EY7 689 aaKnown RBP5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SARGQ9BW04 601 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 TWSG1Q9GZX9 223 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PDE7BQ9NP56 450 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 SMYD2Q9NRG4 433 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 RIC8BQ9NVN3 520 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PDP2Q9P2J9 529 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 LRIT1Q9P2V4 623 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PLLPQ9Y342 182 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PCDHGA11Q9Y5H2 935 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 PRSS21Q9Y6M0 314 aa5.02□□□□□ -1.61
LRIT3-201ENST00000327908 LRRK1Q38SD2 2015 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 TRBC2A0A5B9 178 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 TMEM8BA6NDV4 472 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 OR1I1O60431 355 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 PLIN3O60664 434 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 RFPL1O75677 317 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 EBLN1P0CF75 366 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 MYBL2P10244 700 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 ACPPP15309 386 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 INHBCP55103 352 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 CDKN2DP55273 166 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 STXBP1P61764 594 aaKnown RBP5.01□□□□□ -1.61
LRIT3-201ENST00000327908 MRPS25P82663 173 aaKnown RBP5.01□□□□□ -1.61
LRIT3-201ENST00000327908 BNC1Q01954 994 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 SEMG2Q02383 582 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 ABRQ12979 859 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 SRSF5Q13243 272 aaKnown RBP5.01□□□□□ -1.61
LRIT3-201ENST00000327908 PDK4Q16654 411 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 HP1BP3Q5SSJ5 553 aaPredicted RBP5.01□□□□□ -1.61
LRIT3-201ENST00000327908 AGTRAPQ6RW13 159 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 KRT222Q8N1A0 295 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 EID2Q8N6I1 236 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 GBP7Q8N8V2 638 aaPredicted RBP5.01□□□□□ -1.61
LRIT3-201ENST00000327908 LRRN4CLQ8ND94 238 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 AGBL5Q8NDL9 886 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 PROKR1Q8TCW9 393 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 ZNF382Q96SR6 550 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 SERPINI1Q99574 410 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 PLAC1Q9HBJ0 212 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 HHATLQ9HCP6 504 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 MRPS30Q9NP92 439 aaKnown RBP5.01□□□□□ -1.61
LRIT3-201ENST00000327908 IGSF5Q9NSI5 407 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 ACTR10Q9NZ32 417 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 FAM8A1Q9UBU6 413 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 TBC1D29Q9UFV1 150 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 PLCL2Q9UPR0 1127 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 DNAJC16Q9Y2G8 782 aa5.01□□□□□ -1.61
LRIT3-201ENST00000327908 GSAPA4D1B5 854 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms