RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 IL1RNP18510 177 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 HLCSP50747 726 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 MYBPC3Q14896 1274 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 PLA2G4EQ3MJ16 856 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 GDPD4Q6W3E5 623 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 GPR149Q86SP6 731 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 STK32CQ86UX6 486 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 CALHM3Q86XJ0 350 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 SKA2Q8WVK7 121 aaPredicted RBP21.79■■□□□ 1.08
PNKP-201ENST00000322344 AURKBQ96GD4 344 aaPredicted RBP21.79■■□□□ 1.08
PNKP-201ENST00000322344 DNAJC11Q9NVH1 559 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 ATXN10Q9UBB4 475 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 TMPRSS11EQ9UL52 423 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 G3V2T6 193 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 FGF18O76093 207 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 AP2A2O94973 939 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 PABPC1P11940 636 aaKnown RBP21.79■■□□□ 1.08
PNKP-201ENST00000322344 WDR5P61964 334 aaKnown RBP21.79■■□□□ 1.08
PNKP-201ENST00000322344 ZNF33BQ06732 778 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 DMC1Q14565 340 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 PTCHD3Q3KNS1 767 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 BRAT1Q6PJG6 821 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 DNAJC14Q6Y2X3 702 aaPredicted RBP21.79■■□□□ 1.08
PNKP-201ENST00000322344 BEND7Q8N7W2 519 aaPredicted RBP21.79■■□□□ 1.08
PNKP-201ENST00000322344 TERB1Q8NA31 727 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 CLHC1Q8NHS4 586 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 MCOLN3Q8TDD5 553 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 CORO1BQ9BR76 489 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 ABCG8Q9H221 673 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 CARS2Q9HA77 564 aaKnown RBP21.79■■□□□ 1.08
PNKP-201ENST00000322344 DLGAP4Q9Y2H0 992 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 PCDHB14Q9Y5E9 798 aa21.79■■□□□ 1.08
PNKP-201ENST00000322344 PLXNB3Q9ULL4 1909 aa21.78■■□□□ 1.08
PNKP-201ENST00000322344 ADH1AP07327 375 aa21.78■■□□□ 1.08
PNKP-201ENST00000322344 PCNAP12004 261 aa21.78■■□□□ 1.08
PNKP-201ENST00000322344 TTC23Q5W5X9 447 aa21.78■■□□□ 1.08
PNKP-201ENST00000322344 ENPP6Q6UWR7 440 aa21.78■■□□□ 1.08
PNKP-201ENST00000322344 CLVS1Q8IUQ0 354 aaPredicted RBP21.78■■□□□ 1.08
PNKP-201ENST00000322344 KREMEN2Q8NCW0 462 aa21.78■■□□□ 1.08
PNKP-201ENST00000322344 FAM120BQ96EK7 910 aaKnown RBP21.78■■□□□ 1.08
PNKP-201ENST00000322344 YME1L1Q96TA2 773 aa21.78■■□□□ 1.08
PNKP-201ENST00000322344 SMG9Q9H0W8 520 aaKnown RBP21.78■■□□□ 1.08
PNKP-201ENST00000322344 SERHLQ9NQF3 203 aa21.78■■□□□ 1.08
PNKP-201ENST00000322344 DCAF13Q9NV06 445 aaKnown RBP21.78■■□□□ 1.08
PNKP-201ENST00000322344 USE1Q9NZ43 259 aa21.78■■□□□ 1.08
PNKP-201ENST00000322344 ATP11BQ9Y2G3 1177 aa21.78■■□□□ 1.08
PNKP-201ENST00000322344 H0Y858 1186 aa21.77■■□□□ 1.08
PNKP-201ENST00000322344 WNT9AO14904 365 aa21.77■■□□□ 1.08
PNKP-201ENST00000322344 AREL1O15033 823 aa21.77■■□□□ 1.08
PNKP-201ENST00000322344 CST1P01037 141 aa21.77■■□□□ 1.08
PNKP-201ENST00000322344 RECQLP46063 649 aaPredicted RBP21.77■■□□□ 1.08
PNKP-201ENST00000322344 DCDC1P59894 354 aa21.77■■□□□ 1.08
PNKP-201ENST00000322344 KCNC3Q14003 757 aa21.77■■□□□ 1.08
PNKP-201ENST00000322344 ASTLQ6HA08 431 aaPredicted RBP21.77■■□□□ 1.08
PNKP-201ENST00000322344 GCNT7Q6ZNI0 430 aa21.77■■□□□ 1.08
PNKP-201ENST00000322344 DET1Q7L5Y6 550 aa21.77■■□□□ 1.08
PNKP-201ENST00000322344 FAM86B1Q8N7N1 296 aa21.77■■□□□ 1.08
PNKP-201ENST00000322344 ZNF420Q8TAQ5 688 aaPredicted RBP21.77■■□□□ 1.08
PNKP-201ENST00000322344 TBCDQ9BTW9 1192 aa21.77■■□□□ 1.08
PNKP-201ENST00000322344 TLR9Q9NR96 1032 aa21.77■■□□□ 1.08
PNKP-201ENST00000322344 RAD18Q9NS91 495 aa21.77■■□□□ 1.08
PNKP-201ENST00000322344 NRG2O14511 850 aaPredicted RBP21.77■■□□□ 1.07
PNKP-201ENST00000322344 CREG1O75629 220 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 DDX6P26196 483 aaKnown RBP eCLIP21.77■■□□□ 1.07
PNKP-201ENST00000322344 VIPR1P32241 457 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 ABHD18Q0P651 414 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 PON2Q15165 354 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 ZXDCQ2QGD7 858 aaPredicted RBP21.77■■□□□ 1.07
PNKP-201ENST00000322344 GTDC1Q4AE62 458 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 NEK5Q6P3R8 708 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 TMEM25Q86YD3 366 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 ADHFE1Q8IWW8 467 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 CHST14Q8NCH0 376 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 CSGALNACT1Q8TDX6 532 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 TIFAQ96CG3 184 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 ISOC1Q96CN7 298 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 SOX17Q9H6I2 414 aaPredicted RBP21.77■■□□□ 1.07
PNKP-201ENST00000322344 SLCO3A1Q9UIG8 710 aa21.77■■□□□ 1.07
PNKP-201ENST00000322344 UGDHO60701 494 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 RECQL5O94762 991 aaPredicted RBP21.76■■□□□ 1.07
PNKP-201ENST00000322344 PRKD3O94806 890 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 HOXB9P17482 250 aaPredicted RBP21.76■■□□□ 1.07
PNKP-201ENST00000322344 MNX1P50219 401 aaPredicted RBP21.76■■□□□ 1.07
PNKP-201ENST00000322344 GZMMP51124 257 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 NUP107P57740 925 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 PHC1P78364 1004 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 NKG7Q16617 165 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 FRG2Q64ET8 278 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 Q6ZVU0 165 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 VRK3Q8IV63 474 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 NCLNQ969V3 563 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 FBXL8Q96CD0 374 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 MUS81Q96NY9 551 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 FRG2BQ96QU4 278 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 RBM4BQ9BQ04 359 aaKnown RBP21.76■■□□□ 1.07
PNKP-201ENST00000322344 TUBA1CQ9BQE3 449 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 RBM4Q9BWF3 364 aaKnown RBP21.76■■□□□ 1.07
PNKP-201ENST00000322344 OSBPL10Q9BXB5 764 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 FAM83DQ9H4H8 585 aa21.76■■□□□ 1.07
PNKP-201ENST00000322344 IFT80Q9P2H3 777 aaPredicted RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms