RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TRIM69Q86WT6 500 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 RAB43Q86YS6 212 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 SCML4Q8N228 414 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 NCSTNQ92542 709 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 USP22Q9UPT9 525 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 SLC22A14Q9Y267 594 aa14.94□□□□□ -0.02
VARS2-201ENST00000321897 XIRP1Q702N8 1843 aaKnown RBP14.93□□□□□ -0.02
VARS2-201ENST00000321897 ANKDD1BA6NHY2 528 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 LOC730098B7Z3J9 87 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 COCHO43405 550 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 PABPC1P11940 636 aaKnown RBP14.93□□□□□ -0.02
VARS2-201ENST00000321897 APLP1P51693 650 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 FNDC3BQ53EP0 1204 aaKnown RBP14.93□□□□□ -0.02
VARS2-201ENST00000321897 ZBTB2Q8N680 514 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 STARD8Q92502 1023 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 IL12RB2Q99665 862 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 ASAH2Q9NR71 780 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 ADPRHL2Q9NX46 363 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 MRPS7Q9Y2R9 242 aaKnown RBP14.93□□□□□ -0.02
VARS2-201ENST00000321897 ERAL1O75616 437 aaKnown RBP14.93□□□□□ -0.02
VARS2-201ENST00000321897 CATP04040 527 aaKnown RBP14.93□□□□□ -0.02
VARS2-201ENST00000321897 KCNC1P48547 511 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 MTA1Q13330 715 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 TP53BP2Q13625 1128 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 HSF5Q4G112 596 aaPredicted RBP14.93□□□□□ -0.02
VARS2-201ENST00000321897 FAM131AQ6UXB0 335 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 LUZP2Q86TE4 346 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 GALNT12Q8IXK2 581 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 SORCS1Q8WY21 1168 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 KLK6Q92876 244 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 RELTQ969Z4 430 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 EMILIN2Q9BXX0 1053 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 MTG2Q9H4K7 406 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 TLR9Q9NR96 1032 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 SCML2Q9UQR0 700 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 LAMB2P55268 1798 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 ZSCAN5BA6NJL1 495 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 BTN3A3O00478 584 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 TSPAN4O14817 238 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 ADAM12O43184 909 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 TPST2O60704 377 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 ZNF26P17031 533 aaPredicted RBP14.93□□□□□ -0.02
VARS2-201ENST00000321897 NANOGP8Q6NSW7 305 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 DSG4Q86SJ6 1040 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 KRTCAP2Q8N6L1 136 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 ZNF597Q96LX8 424 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 ANKRD60Q9BZ19 345 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 SLAMF8Q9P0V8 285 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 ASF1AQ9Y294 204 aa14.93□□□□□ -0.02
VARS2-201ENST00000321897 ATF4P18848 351 aaPredicted RBP14.92□□□□□ -0.02
VARS2-201ENST00000321897 MATN1P21941 496 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 RFX4Q33E94 735 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 TAS1R1Q7RTX1 841 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 OR8H1Q8NGG4 311 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 TBC1D15Q8TC07 691 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 FUBP3Q96I24 572 aaKnown RBP eCLIP14.92□□□□□ -0.02
VARS2-201ENST00000321897 CCM2LQ9NUG4 571 aaPredicted RBP14.92□□□□□ -0.02
VARS2-201ENST00000321897 TMEM9Q9P0T7 183 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 SNX6Q9UNH7 406 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 ELOVL7A1L3X0 281 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 BCAS1O75363 584 aaPredicted RBP14.92□□□□□ -0.02
VARS2-201ENST00000321897 ITIH1P19827 911 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 AGXTP21549 392 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 VARSP26640 1264 aaKnown RBP14.92□□□□□ -0.02
VARS2-201ENST00000321897 PLA2G16P53816 162 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 TLE2Q04725 743 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 QPRTQ15274 297 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 SYCE2Q6PIF2 218 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 PROSER1Q86XN7 944 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 NPAS4Q8IUM7 802 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 DEPDC4Q8N2C3 294 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 TMEM246Q9BRR3 403 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 FAM124BQ9H5Z6 455 aaPredicted RBP14.92□□□□□ -0.02
VARS2-201ENST00000321897 INTS10Q9NVR2 710 aaKnown RBP14.92□□□□□ -0.02
VARS2-201ENST00000321897 DOCK5Q9H7D0 1870 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 ZW10O43264 779 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 SERPINA1P01009 418 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 DDX5P17844 614 aaKnown RBP14.92□□□□□ -0.02
VARS2-201ENST00000321897 CAPN3P20807 821 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 INTS11Q5TA45 600 aaKnown RBP14.92□□□□□ -0.02
VARS2-201ENST00000321897 PLET1Q6UQ28 207 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 SYVN1Q86TM6 617 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 UXS1Q8NBZ7 420 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 ASZ1Q8WWH4 475 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 SLC13A3Q8WWT9 602 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 VPS35Q96QK1 796 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 RHBGQ9H310 441 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 TESMINQ9Y4I5 508 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 MAP4K5Q9Y4K4 846 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 YIPF1Q9Y548 306 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 TRAV19A0A0A6YYK7 116 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 H0YC42 278 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 STK25O00506 426 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 DFNA5O60443 496 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 CD1DP15813 335 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 MAPK1P28482 360 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 DPP6P42658 865 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 KIR3DL1P43629 444 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 MAPKAPK2P49137 400 aa14.92□□□□□ -0.02
VARS2-201ENST00000321897 ABATP80404 500 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms