RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 CES5AQ6NT32 575 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 SERPINA13PQ6UXR4 307 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 RBM23Q86U06 439 aaKnown RBP16.98■□□□□ 0.31
COL9A1-201ENST00000320755 GLB1L3Q8NCI6 653 aaPredicted RBP16.98■□□□□ 0.31
COL9A1-201ENST00000320755 PNPT1Q8TCS8 783 aaKnown RBP16.98■□□□□ 0.31
COL9A1-201ENST00000320755 TRMT2BQ96GJ1 504 aaKnown RBP16.98■□□□□ 0.31
COL9A1-201ENST00000320755 APIPQ96GX9 242 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 HIST1H2AHQ96KK5 128 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 HIST1H2AJQ99878 128 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 SH3GL1Q99961 368 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 H2AFJQ9BTM1 129 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 SLC32A1Q9H598 525 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 MRPL17Q9NRX2 175 aaKnown RBP16.98■□□□□ 0.31
COL9A1-201ENST00000320755 ANAPC1Q9H1A4 1944 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 MYO1GB0I1T2 1018 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 MITFO75030 526 aaPredicted RBP16.98■□□□□ 0.31
COL9A1-201ENST00000320755 CYP4B1P13584 511 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 PFKLP17858 780 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 LHCGRP22888 699 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 DCKP27707 260 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 PTSQ03393 145 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 GPR33Q49SQ1 333 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 ELMSAN1Q6PJG2 1045 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 DOK6Q6PKX4 331 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 AADATQ8N5Z0 425 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 BEND7Q8N7W2 519 aaPredicted RBP16.98■□□□□ 0.31
COL9A1-201ENST00000320755 SNX19Q92543 992 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 ACDQ96AP0 544 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 MBOAT4Q96T53 435 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 OSBPL10Q9BXB5 764 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 PLGRKTQ9HBL7 147 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 TRPS1Q9UHF7 1281 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 SLCO3A1Q9UIG8 710 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 NRG2O14511 850 aaPredicted RBP16.98■□□□□ 0.31
COL9A1-201ENST00000320755 PRSS23O95084 383 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 ZNF648Q5T619 568 aaPredicted RBP16.98■□□□□ 0.31
COL9A1-201ENST00000320755 TTC23Q5W5X9 447 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 GAREM2Q75VX8 874 aa16.98■□□□□ 0.31
COL9A1-201ENST00000320755 PER2O15055 1255 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 SCELO95171 688 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 URODP06132 367 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 CRHBPP24387 322 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 SLC14A1Q13336 389 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 CTU2Q2VPK5 515 aaKnown RBP16.97■□□□□ 0.31
COL9A1-201ENST00000320755 Q6ZNB5 142 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 EID3Q8N140 333 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 RNF217Q8TC41 542 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 USP7Q93009 1102 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 SCAMP4Q969E2 229 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 CEP295NLQ96MC4 621 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 CCDC115Q96NT0 180 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 IL21Q9HBE4 155 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 ZDHHC3Q9NYG2 299 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 PPT2Q9UMR5 302 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 A0A1W2PRU2 124 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 TTKP33981 857 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 DCTP40126 519 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 CD47Q08722 323 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 SIM2Q14190 667 aaPredicted RBP16.97■□□□□ 0.31
COL9A1-201ENST00000320755 NEK5Q6P3R8 708 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 PARP8Q8N3A8 854 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 DCAF13Q9NV06 445 aaKnown RBP16.97■□□□□ 0.31
COL9A1-201ENST00000320755 KIAA1522Q9P206 1035 aaPredicted RBP16.97■□□□□ 0.31
COL9A1-201ENST00000320755 VPS4AQ9UN37 437 aa16.97■□□□□ 0.31
COL9A1-201ENST00000320755 RFXANKO14593 260 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 SRCP12931 536 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 POM121L1PQ3SYA9 428 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 LDLRAP1Q5SW96 308 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 C6orf141Q5SZD1 244 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 LYPLAL1Q5VWZ2 237 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 ZCCHC8Q6NZY4 707 aaKnown RBP16.96■□□□□ 0.31
COL9A1-201ENST00000320755 TPRG1Q6ZUI0 275 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 ADHFE1Q8IWW8 467 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 TMEM132CQ8N3T6 1108 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 MRPS31Q92665 395 aaKnown RBP16.96■□□□□ 0.31
COL9A1-201ENST00000320755 BARD1Q99728 777 aaKnown RBP16.96■□□□□ 0.31
COL9A1-201ENST00000320755 P2RY13Q9BPV8 354 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 YTHDF1Q9BYJ9 559 aaKnown RBP16.96■□□□□ 0.31
COL9A1-201ENST00000320755 SUV39H2Q9H5I1 410 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 SERHLQ9NQF3 203 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 IRAK4Q9NWZ3 460 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 J3QRK9 145 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 PITPNM1O00562 1244 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 XPNPEP2O43895 674 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 ZBTB11O95625 1053 aaPredicted RBP16.96■□□□□ 0.31
COL9A1-201ENST00000320755 FTH1P02794 183 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 SDC1P18827 310 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 CCNA2P20248 432 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 SNRPD1P62314 119 aaKnown RBP16.96■□□□□ 0.31
COL9A1-201ENST00000320755 PPP2R2BQ00005 443 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 ANKRD26P1Q6NSI1 321 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 DPY19L3Q6ZPD9 716 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 CHDHQ8NE62 594 aaPredicted RBP16.96■□□□□ 0.31
COL9A1-201ENST00000320755 ZNF420Q8TAQ5 688 aaPredicted RBP16.96■□□□□ 0.31
COL9A1-201ENST00000320755 FOXJ1Q92949 421 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 FBXL8Q96CD0 374 aa16.96■□□□□ 0.31
COL9A1-201ENST00000320755 MTERF1Q99551 399 aaKnown RBP16.96■□□□□ 0.31
COL9A1-201ENST00000320755 RBM4BQ9BQ04 359 aaKnown RBP16.96■□□□□ 0.31
COL9A1-201ENST00000320755 RBM4Q9BWF3 364 aaKnown RBP16.96■□□□□ 0.31
COL9A1-201ENST00000320755 DGKBQ9Y6T7 804 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms