RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 NAGLUP54802 743 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 GUCY1A3Q02108 690 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 CHI3L2Q15782 390 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 CCDC6Q16204 474 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 ZXDCQ2QGD7 858 aaPredicted RBP13.2□□□□□ -0.3
PRPF18-201ENST00000320054 TUBB8Q3ZCM7 444 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 C14orf28Q4W4Y0 310 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 UNC50Q53HI1 259 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 ZCCHC8Q6NZY4 707 aaKnown RBP13.2□□□□□ -0.3
PRPF18-201ENST00000320054 RGS9BPQ6ZS82 235 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 LRRC70Q7Z2Q7 622 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 ARL14Q8N4G2 192 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 MINDY1Q8N5J2 469 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 ARL10Q8N8L6 244 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 OR52E1Q8NGJ3 308 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 OR2L8Q8NGY9 312 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 OR4C6Q8NH72 309 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 LRRC8CQ8TDW0 803 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 ZNF75CPQ92670 426 aaPredicted RBP13.2□□□□□ -0.3
PRPF18-201ENST00000320054 SH3KBP1Q96B97 665 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 GATA5Q9BWX5 397 aaPredicted RBP13.2□□□□□ -0.3
PRPF18-201ENST00000320054 GTPBP2Q9BX10 602 aaKnown RBP13.2□□□□□ -0.3
PRPF18-201ENST00000320054 TWSG1Q9GZX9 223 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 SMOC1Q9H4F8 434 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 MANSC1Q9H8J5 431 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 DNAAF2Q9NVR5 837 aaKnown RBP13.2□□□□□ -0.3
PRPF18-201ENST00000320054 HEATR5BQ9P2D3 2071 aa13.2□□□□□ -0.3
PRPF18-201ENST00000320054 PRAMEF33A0A0G2JMD5 474 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 LNP1A1A4G5 178 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 FAM221BA6H8Z2 402 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 KRT87PA6NCN2 255 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 TMEM114B3SHH9 223 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 E2F3O00716 465 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 SNUPNO95149 360 aaKnown RBP13.19□□□□□ -0.3
PRPF18-201ENST00000320054 SIX3O95343 332 aaPredicted RBP13.19□□□□□ -0.3
PRPF18-201ENST00000320054 LMNAP02545 664 aaKnown RBP13.19□□□□□ -0.3
PRPF18-201ENST00000320054 CCND1P24385 295 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 PIK3CGP48736 1102 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 HSPA7P48741 367 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 AGTR2P50052 363 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 ATXN3P54252 364 aaPredicted RBP13.19□□□□□ -0.3
PRPF18-201ENST00000320054 GYS2P54840 703 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 HHEXQ03014 270 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 GPR18Q14330 331 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 PTCHD3Q3KNS1 767 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 CFAP157Q5JU67 520 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 ATG16L1Q676U5 607 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 TCEAL6Q6IPX3 200 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 TMEM26Q6ZUK4 368 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 FRMD7Q6ZUT3 714 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 SFTPA2Q8IWL1 248 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 LRRC56Q8IYG6 542 aaPredicted RBP13.19□□□□□ -0.3
PRPF18-201ENST00000320054 SYTL1Q8IYJ3 562 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 CCNYL1Q8N7R7 359 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 FAM181AQ8N9Y4 354 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 PPP1R14CQ8TAE6 165 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 ZNF483Q8TF39 744 aaPredicted RBP13.19□□□□□ -0.3
PRPF18-201ENST00000320054 TCEAL3Q969E4 200 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 CNDP1Q96KN2 507 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 TRMOQ9BU70 441 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 SGPP1Q9BX95 441 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.19□□□□□ -0.3
PRPF18-201ENST00000320054 DRC3Q9H069 523 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 GSTO2Q9H4Y5 243 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 SLC32A1Q9H598 525 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 OR6C2Q9NZP2 312 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 OPTCQ9UBM4 332 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 PCTPQ9UKL6 214 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 PLAGL1Q9UM63 463 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 ICKQ9UPZ9 632 aa13.19□□□□□ -0.3
PRPF18-201ENST00000320054 FRYLO94915 3013 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 LRRC14BA6NHZ5 514 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 LILRA5A6NI73 299 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 E7ENX8 843 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 K7EPI3 171 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 SUPT7LO94864 414 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 MAZP56270 477 aaKnown RBP13.18□□□□□ -0.3
PRPF18-201ENST00000320054 TAP2Q03519 686 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 GALNT1Q10472 559 aaPredicted RBP13.18□□□□□ -0.3
PRPF18-201ENST00000320054 BST1Q10588 318 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 STX3Q13277 289 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 NAE1Q13564 534 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 RCN2Q14257 317 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 SUZ12Q15022 739 aaKnown RBP13.18□□□□□ -0.3
PRPF18-201ENST00000320054 CSRP2Q16527 193 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 C18orf21Q32NC0 220 aaPredicted RBP13.18□□□□□ -0.3
PRPF18-201ENST00000320054 CAPN13Q6MZZ7 669 aaPredicted RBP13.18□□□□□ -0.3
PRPF18-201ENST00000320054 DBX2Q6ZNG2 339 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 ZCCHC23Q6ZST2 131 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 ZNF438Q7Z4V0 828 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 AMIGO1Q86WK6 493 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 GATAD2AQ86YP4 633 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 SLC35F3Q8IY50 421 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 KYQ8NBH2 561 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 OR2I1PQ8NGU4 316 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 PPP4R1Q8TF05 950 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 SETD7Q8WTS6 366 aaKnown RBP13.18□□□□□ -0.3
PRPF18-201ENST00000320054 LCN9Q8WX39 176 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 SMPDL3AQ92484 453 aa13.18□□□□□ -0.3
PRPF18-201ENST00000320054 IL17FQ96PD4 163 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms