RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 KCNE1P15382 129 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 UBA1P22314 1058 aaKnown RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 WARSP23381 471 aaKnown RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 TGFBR1P36897 503 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 RNF4P78317 190 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 ANGPT1Q15389 498 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 KLHL12Q53G59 568 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 PDE12Q6L8Q7 609 aaKnown RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 PKN3Q6P5Z2 889 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 MILR1Q7Z6M3 343 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 CMTR2Q8IYT2 770 aaKnown RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 C9orf62Q8N4C0 152 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 ADAM32Q8TC27 787 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 L3HYPDHQ96EM0 354 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 PPP1R36Q96LQ0 422 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 ZSWIM3Q96MP5 696 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 GPR137Q96N19 417 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 PPP1R16BQ96T49 567 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 GAS2L1Q99501 681 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 SDHCQ99643 169 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 GPR20Q99678 358 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 ADPGKQ9BRR6 497 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 CCDC90BQ9GZT6 254 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 MS4A7Q9GZW8 240 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 ATP13A1Q9HD20 1204 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 TBC1D13Q9NVG8 400 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 COPZ2Q9P299 210 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 KCNH4Q9UQ05 1017 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 CBY1Q9Y3M2 126 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 TRBV23-1A0A0A0MS06 115 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 ZCWPW2A0A1B0GU75 182 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 DHRS12A0PJE2 317 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 MROH6A6NGR9 719 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 WWP2O00308 870 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 PITPNM1O00562 1244 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 SLC30A4O14863 429 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 HOXA2O43364 376 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 TRIM3O75382 744 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 PRSS23O95084 383 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 APOL3O95236 402 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 C22orf31O95567 290 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 ATP6V1B2P21281 511 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 PTAFRP25105 342 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 ACVR2AP27037 513 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 HLA-DMAP28067 261 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 GSTM5P46439 218 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 SUOXP51687 545 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 BCAT1P54687 386 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 BCAR1P56945 870 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 DCDC1P59894 354 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 EMX1Q04741 257 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 TCP10Q12799 353 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 INPP5AQ14642 412 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 SSPNQ14714 243 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 FAM76BQ5HYJ3 339 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 SPANXN2Q5MJ10 180 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 C6orf141Q5SZD1 244 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 ANGPTL8Q6UXH0 198 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 NAPRTQ6XQN6 538 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 FAM183BPQ6ZVS7 135 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 PDZD4Q76G19 769 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 RTL10Q7L3V2 364 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 PIWIL4Q7Z3Z4 852 aaKnown RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 ERO1BQ86YB8 467 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 TMC8Q8IU68 726 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 C8orf59Q8N0T1 100 aaPredicted RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 SRFBP1Q8NEF9 429 aaKnown RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 HEXDCQ8WVB3 486 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 HTR3CQ8WXA8 447 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 ELP4Q96EB1 424 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 TRMT61AQ96FX7 289 aaKnown RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 NT5C1AQ9BXI3 368 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 MMP28Q9H239 520 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 PPIL3Q9H2H8 161 aaKnown RBP6.51□□□□□ -1.37
ZNF540-201ENST00000316433 RDH8Q9NYR8 311 aa6.51□□□□□ -1.37
ZNF540-201ENST00000316433 TP53BP1Q12888 1972 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-201ENST00000316433 EFCAB9A8MZ26 197 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 STX16O14662 325 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 INPPL1O15357 1258 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 TBC1D4O60343 1298 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 TRIM13O60858 407 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 URODP06132 367 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 LCKP06239 509 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 POLBP06746 335 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 FGF4P08620 206 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 UMPSP11172 480 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 PTPRAP18433 802 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 CYP2B6P20813 491 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 VAMP1P23763 118 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 MYL9P24844 172 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 OXTRP30559 389 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 ETV6P41212 452 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 BRCC3P46736 316 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 FNTBP49356 437 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 P2RY4P51582 365 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 C21orf58P58505 322 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 ETFDHQ16134 617 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 SLC25A52Q3SY17 297 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 RAB41Q5JT25 222 aa6.5□□□□□ -1.37
ZNF540-201ENST00000316433 CELF3Q5SZQ8 465 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms