RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 FBXL20Q96IG2 436 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 DDX28Q9NUL7 540 aaKnown RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ENOPH1Q9UHY7 261 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 SH3GLB1Q9Y371 365 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 GPSM3Q9Y4H4 160 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 MAP4K5Q9Y4K4 846 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 FER1L6Q2WGJ9 1857 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 SAP18O00422 153 aaKnown RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 KLKB1P03952 638 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ITGA2P17301 1181 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 HOXB6P17509 224 aaKnown RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 PREPP48147 710 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 MANFP55145 182 aaKnown RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 CASP9P55211 416 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ARF5P84085 180 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 LAPTM5Q13571 262 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 DPY19L1Q2PZI1 675 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ATP13A5Q4VNC0 1218 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 CES4AQ5XG92 561 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ARMC6Q6NXE6 501 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 LETMD1Q6P1Q0 360 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 CASP12Q6UXS9 341 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 MARVELD2Q8N4S9 558 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ZNF614Q8N883 585 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 FERD3LQ96RJ6 166 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 KLF16Q9BXK1 252 aaPredicted RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 FANCEQ9HB96 536 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 IL26Q9NPH9 171 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ZC4H2Q9NQZ6 224 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ENTPD4Q9Y227 616 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 RBBP6Q7Z6E9 1792 aaKnown RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 TRIP12Q14669 1992 aaPredicted RBP13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 IGLV3-10A0A075B6K4 115 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 H3BSA7 217 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 LATS1O95835 1130 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 ZNF30P17039 623 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 BDKRB1P46663 353 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 FAM189BP81408 668 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 DMPKQ09013 629 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 HKDC1Q2TB90 917 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 USP39Q53GS9 565 aaKnown RBP13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 PRR23BQ6ZRT6 265 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 BNIPLQ7Z465 357 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 GRASPQ7Z6J2 395 aaPredicted RBP13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 BEND7Q8N7W2 519 aaPredicted RBP13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 HM13Q8TCT9 377 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 IRF7Q92985 503 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 DOLKQ9UPQ8 538 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 CLIC1O00299 241 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 RPS17P08708 135 aaKnown RBP13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 NR4A1P22736 598 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 NTSP30990 170 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 MRPS15P82914 257 aaKnown RBP13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 TYSND1Q2T9J0 566 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 GALNT7Q86SF2 657 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 OOSP2Q86WS3 158 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 KRT73Q86Y46 540 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 SVOPLQ8N434 492 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 KRTCAP2Q8N6L1 136 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 C1QTNF7Q9BXJ2 289 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 LOC100506127A0A0U1RQW1 187 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 B4GALT3O60512 393 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 ANGPTL1O95841 491 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 PCCBP05166 539 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 GPX3P22352 226 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 KCNC1P48547 511 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 PHKG1Q16816 387 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 C1orf52Q8N6N3 182 aaKnown RBP13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 OR52J3Q8NH60 311 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 SLC45A3Q96JT2 553 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 VPS35Q96QK1 796 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 C11orf49Q9H6J7 331 aa13.09□□□□□ -0.31
PCDHB9-201ENST00000316105 TGM5O43548 720 aa13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 EEDO75530 441 aaKnown RBP13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 LEFTY1O75610 366 aa13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 NPPAP01160 153 aa13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 C1QAP02745 245 aa13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 SERPINB1P30740 379 aa13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 OR4D2P58180 307 aa13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 LRP8Q14114 963 aa13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 RSPO2Q6UXX9 243 aaPredicted RBP13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 THOC6Q86W42 341 aaKnown RBP13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 DNAJB8Q8NHS0 232 aa13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 SORCS1Q8WY21 1168 aa13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 PRICKLE1Q96MT3 831 aaPredicted RBP13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 AIF1LQ9BQI0 150 aa13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 C6orf62Q9GZU0 229 aaPredicted RBP13.08□□□□□ -0.31
PCDHB9-201ENST00000316105 A6NHS1 94 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 PCDH7O60245 1069 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 ETV3P41162 512 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 SGSHP51688 502 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 GRIK2Q13002 908 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 MAPK11Q15759 364 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 DGUOKQ16854 277 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 AGTRAPQ6RW13 159 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 SLC39A5Q6ZMH5 540 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 TCEAL8Q8IYN2 117 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 GATA6Q92908 595 aa13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 ZNF641Q96N77 438 aaPredicted RBP13.08□□□□□ -0.32
PCDHB9-201ENST00000316105 GPR78Q96P69 363 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms