RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 KIAA1671Q9BY89 1806 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 A8MU76 341 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 LOC730098B7Z3J9 87 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 SLCO1B7G3V0H7 640 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 AGRPO00253 132 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 OR7A17O14581 309 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 B3GALT4O96024 378 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ADH1CP00326 375 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 IMPDH2P12268 514 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ATP1B2P14415 290 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-202ENST00000315962 CD72P21854 359 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 MATN1P21941 496 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 SLC7A1P30825 629 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 GDI1P31150 447 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 SLC26A3P40879 764 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 IL12RB1P42701 662 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 NSG1P42857 185 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 PSMD8P48556 350 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 HSPA13P48723 471 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ESRRGP62508 458 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 POLR2LP62875 67 aaKnown RBP7.42□□□□□ -1.22
TRIM55-202ENST00000315962 MERTKQ12866 999 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 STX5Q13190 355 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ITGADQ13349 1161 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 LAPTM5Q13571 262 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 DDX39BQ13838 428 aaKnown RBP7.42□□□□□ -1.22
TRIM55-202ENST00000315962 GTF2H2Q13888 395 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 PTGR1Q14914 329 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 CYP2A13Q16696 494 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ADNP2Q6IQ32 1131 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 NANOGP8Q6NSW7 305 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 GTF2H2CQ6P1K8 395 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 GALNT18Q6P9A2 607 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 TFAP2CQ92754 450 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 MAELQ96JY0 434 aaKnown RBP7.42□□□□□ -1.22
TRIM55-202ENST00000315962 NPLQ9BXD5 320 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ADNPQ9H2P0 1102 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 RPF2Q9H7B2 306 aaKnown RBP7.42□□□□□ -1.22
TRIM55-202ENST00000315962 PRDM8Q9NQV8 689 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 CMTM6Q9NX76 183 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 SLC8A2Q9UPR5 921 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 SLC22A14Q9Y267 594 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 PCYT1BQ9Y5K3 369 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-202ENST00000315962 CELSR3Q9NYQ7 3312 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 TCRBV3S1A0A5B6 114 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ARPC2O15144 300 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ESRRBO95718 433 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 MSH3P20585 1137 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 DGKAP23743 735 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 MAT2AP31153 395 aaKnown RBP7.42□□□□□ -1.22
TRIM55-202ENST00000315962 TIE1P35590 1138 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 RGS4P49798 205 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 DGKQP52824 942 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 STX1BP61266 288 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 SQLEQ14534 574 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ZNF805Q5CZA5 627 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 EGFLAMQ63HQ2 1017 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 UBE2R2Q712K3 238 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-202ENST00000315962 TRAPPC5Q8IUR0 188 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 SDR16C5Q8N3Y7 309 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 SLC15A4Q8N697 577 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 RASGEF1AQ8N9B8 481 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 PSD4Q8NDX1 1056 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ZNF641Q96N77 438 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-202ENST00000315962 MYADMQ96S97 322 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 HTATIP2Q9BUP3 242 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 FAM126AQ9BYI3 521 aaPredicted RBP7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ANKRD60Q9BZ19 345 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 CPEB1Q9BZB8 566 aaKnown RBP7.42□□□□□ -1.22
TRIM55-202ENST00000315962 OR2AG1Q9H205 316 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 FANCEQ9HB96 536 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 TM7SF3Q9NS93 570 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 SERGEFQ9UGK8 458 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 UTS2RQ9UKP6 389 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 RIMKLBQ9ULI2 386 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 PDE10AQ9Y233 779 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 FADS3Q9Y5Q0 445 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ST14Q9Y5Y6 855 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 PIKFYVEQ9Y2I7 2098 aa7.42□□□□□ -1.22
TRIM55-202ENST00000315962 ANGPT2O15123 496 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SYNCRIPO60506 623 aaKnown RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RECQL5O94762 991 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 OCM2P0CE71 109 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 OCMP0CE72 109 aaPredicted RBP7.41□□□□□ -1.22
TRIM55-202ENST00000315962 ERVK-21P61565 698 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 UBE3AQ05086 875 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 NR6A1Q15406 480 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 TIGD2Q4W5G0 525 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 C9orf64Q5T6V5 341 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 KANK2Q63ZY3 851 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RAET1GQ6H3X3 334 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SYCE2Q6PIF2 218 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 LIPIQ6XZB0 460 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 PRR23BQ6ZRT6 265 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 Q6ZSR9 355 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 ERMP1Q7Z2K6 904 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 FAM124AQ86V42 546 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SLC15A3Q8IY34 581 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 GPR65Q8IYL9 337 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 AFAP1L2Q8N4X5 818 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms