RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 HMG20AQ9NP66 347 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 AKIP1Q9NQ31 210 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 ZNF229Q9UJW7 825 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 XIRP2A4UGR9 3374 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.2■□□□□ 0.18
SSH3-201ENST00000308127 DUSP11O75319 330 aaKnown RBP16.2■□□□□ 0.18
SSH3-201ENST00000308127 CD160O95971 181 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 F11P03951 625 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 ATF6P18850 670 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 MSH3P20585 1137 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 CORO1AP31146 461 aaKnown RBP16.2■□□□□ 0.18
SSH3-201ENST00000308127 ZNF177Q13360 481 aaPredicted RBP16.2■□□□□ 0.18
SSH3-201ENST00000308127 CACHD1Q5VU97 1274 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 ADAMTSL2Q86TH1 951 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 SLC7A5P1Q8MH63 180 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 ACPTQ9BZG2 426 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 MAGEH1Q9H213 219 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 RNF167Q9H6Y7 350 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 GMPPBQ9Y5P6 360 aa16.2■□□□□ 0.18
SSH3-201ENST00000308127 M0R129 80 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 CLDN7O95471 211 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 NPPAP01160 153 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 PDYNP01213 254 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 ESR1P03372 595 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 RCVRNP35243 200 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 PTGER3P43115 390 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 MVKQ03426 396 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 PCBP2Q15366 365 aaKnown RBP eCLIP16.19■□□□□ 0.18
SSH3-201ENST00000308127 Q8N9G6 341 aaPredicted RBP16.19■□□□□ 0.18
SSH3-201ENST00000308127 APOLD1Q96LR9 279 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 P2RY12Q9H244 342 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 C1orf109Q9NX04 203 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 PDP1Q9P0J1 537 aaPredicted RBP16.19■□□□□ 0.18
SSH3-201ENST00000308127 PPT2Q9UMR5 302 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 GOLGA4Q13439 2230 aaKnown RBP16.19■□□□□ 0.18
SSH3-201ENST00000308127 UNC80Q8N2C7 3258 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 KDELR3O43731 214 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 FAM20BO75063 409 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 HPRP00739 348 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 P2RY8Q86VZ1 359 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 ANKRD13BQ86YJ7 626 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 TPD52L3Q96J77 140 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 CNDP2Q96KP4 475 aaKnown RBP16.19■□□□□ 0.18
SSH3-201ENST00000308127 ADGRE3Q9BY15 652 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 ZBTB20Q9HC78 741 aaPredicted RBP16.19■□□□□ 0.18
SSH3-201ENST00000308127 SIRT5Q9NXA8 310 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 IL17CQ9P0M4 197 aa16.19■□□□□ 0.18
SSH3-201ENST00000308127 MBD1Q9UIS9 605 aaPredicted RBP16.19■□□□□ 0.18
SSH3-201ENST00000308127 VWA8A3KMH1 1905 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 MANBAO00462 879 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 AQP9O43315 295 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 FKBP9O95302 570 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 VIPP01282 170 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 ITIH1P19827 911 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 DGKEP52429 567 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 RHOAP61586 193 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 VLDLRP98155 873 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 DDX39BQ13838 428 aaKnown RBP16.18■□□□□ 0.18
SSH3-201ENST00000308127 MBTPS1Q14703 1052 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 CLCA4Q14CN2 919 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 CPZQ66K79 652 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 RFLNAQ6ZTI6 216 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 FKBP9P1Q75LS8 142 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 ATG16L2Q8NAA4 619 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 FUBP3Q96I24 572 aaKnown RBP eCLIP16.18■□□□□ 0.18
SSH3-201ENST00000308127 UROC1Q96N76 676 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 CCDC115Q96NT0 180 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 GABRQQ9UN88 632 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 CPSF4O95639 269 aaKnown RBP16.18■□□□□ 0.18
SSH3-201ENST00000308127 TNFRSF1BP20333 461 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 S100A3P33764 101 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 KCNC4Q03721 635 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 GPR149Q86SP6 731 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 MFSD4AQ8N468 514 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 WFDC5Q8TCV5 224 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 SELENOMQ8WWX9 145 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 TRIB2Q92519 343 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 PYURFQ96I23 114 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 FAM126AQ9BYI3 521 aaPredicted RBP16.18■□□□□ 0.18
SSH3-201ENST00000308127 CLMPQ9H6B4 373 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 SERHLQ9NQF3 203 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 SCN10AQ9Y5Y9 1956 aa16.18■□□□□ 0.18
SSH3-201ENST00000308127 PFDN6O15212 129 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 SMAD6O43541 496 aaKnown RBP16.17■□□□□ 0.18
SSH3-201ENST00000308127 COL6A1P12109 1028 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 ATP5C1P36542 298 aaKnown RBP16.17■□□□□ 0.18
SSH3-201ENST00000308127 NUDT6P53370 316 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 TPTEP56180 551 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 CYP4F2P78329 520 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 PRSS36Q5K4E3 855 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 COLEC12Q5KU26 742 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 GPR153Q6NV75 609 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 CCDC71Q8IV32 467 aaPredicted RBP16.17■□□□□ 0.18
SSH3-201ENST00000308127 SVOPLQ8N434 492 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 PIK3C3Q8NEB9 887 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 APIPQ96GX9 242 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 MROQ9BYG7 248 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 POU2F3Q9UKI9 436 aa16.17■□□□□ 0.18
SSH3-201ENST00000308127 CAB39Q9Y376 341 aaPredicted RBP16.17■□□□□ 0.18
SSH3-201ENST00000308127 TNPO3Q9Y5L0 923 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms