RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ARL14Q8N4G2 192 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 DQX1Q8TE96 717 aaKnown RBP13.15□□□□□ -0.3
TRIM56-201ENST00000306085 C15orf40Q8WUR7 153 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 MYO19Q96H55 970 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 MSRAQ9UJ68 235 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 ZBTB2Q8N680 514 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 PBRM1Q86U86 1689 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.15□□□□□ -0.3
TRIM56-201ENST00000306085 A0A1B0GVT2 93 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 NPIPA5E9PKD4 350 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 FBXO48Q5FWF7 155 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 POLR2J3Q9H1A7 115 aaKnown RBP13.15□□□□□ -0.3
TRIM56-201ENST00000306085 PCYOX1Q9UHG3 505 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 NPIPA1Q9UND3 350 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 HTR3EA5X5Y0 456 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 COL6A2P12110 1019 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 ERI1Q8IV48 349 aaKnown RBP13.15□□□□□ -0.3
TRIM56-201ENST00000306085 SIGLEC16A6NMB1 481 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 MAGEB17A8MXT2 336 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 TRAFD1O14545 582 aaPredicted RBP13.15□□□□□ -0.3
TRIM56-201ENST00000306085 TRAPPC6AO75865 159 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 SLC35G6P0C7Q6 338 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 GMPSP49915 693 aaPredicted RBP13.15□□□□□ -0.3
TRIM56-201ENST00000306085 SLC27A1Q6PCB7 646 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 CFAP52Q8N1V2 620 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 SUN3Q8TAQ9 357 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 IL4I1Q96RQ9 567 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 MAN2C1Q9NTJ4 1040 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 CYP3A7-CYP3A51PA0A087WV96 503 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 DNAJA2O60884 412 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 FGF1P05230 155 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 CYP3A7P24462 503 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 KLF1Q13351 362 aaPredicted RBP13.15□□□□□ -0.3
TRIM56-201ENST00000306085 TMEM214Q6NUQ4 689 aaKnown RBP13.15□□□□□ -0.3
TRIM56-201ENST00000306085 TRMT2AQ8IZ69 625 aaKnown RBP13.15□□□□□ -0.3
TRIM56-201ENST00000306085 SHANK2Q9UPX8 1470 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 ENTPD1P49961 510 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 CLCN2P51788 898 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 TNFAIP8L2Q6P589 184 aaPredicted RBP13.15□□□□□ -0.3
TRIM56-201ENST00000306085 KLHDC10Q6PID8 442 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 TREML1Q86YW5 311 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 CREB3L1Q96BA8 519 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 VILLO15195 856 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 B3GALT2O43825 422 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 ZNF529Q6P280 563 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 RBM15BQ8NDT2 890 aaKnown RBP13.15□□□□□ -0.3
TRIM56-201ENST00000306085 OR56B2PQ8NGI1 322 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 THEM6Q8WUY1 208 aa13.15□□□□□ -0.3
TRIM56-201ENST00000306085 CXCR6O00574 342 aa13.15□□□□□ -0.31
TRIM56-201ENST00000306085 FAM189A2Q15884 450 aa13.15□□□□□ -0.31
TRIM56-201ENST00000306085 IL23RQ5VWK5 629 aa13.15□□□□□ -0.31
TRIM56-201ENST00000306085 PSRC1Q6PGN9 363 aaPredicted RBP13.15□□□□□ -0.31
TRIM56-201ENST00000306085 OR5M3Q8NGP4 307 aa13.15□□□□□ -0.31
TRIM56-201ENST00000306085 ZNF701Q9NV72 531 aaPredicted RBP13.15□□□□□ -0.31
TRIM56-201ENST00000306085 HMGXB4Q9UGU5 601 aa13.15□□□□□ -0.31
TRIM56-201ENST00000306085 RPL36Q9Y3U8 105 aaKnown RBP13.15□□□□□ -0.31
TRIM56-201ENST00000306085 PCDHGA6Q9Y5G7 932 aa13.15□□□□□ -0.31
TRIM56-201ENST00000306085 C12orf71A8MTZ7 269 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 CMPK1P30085 196 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 TSGA10IPQ3SY00 556 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 CRB2Q5IJ48 1285 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 TPRG1LQ5T0D9 272 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 ARGFXA6NJG6 315 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 ENPP2Q13822 863 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 NPLQ9BXD5 320 aaPredicted RBP13.14□□□□□ -0.31
TRIM56-201ENST00000306085 TAS2R10Q9NYW0 307 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 TNFRSF10DQ9UBN6 386 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 PKMP14618 531 aaKnown RBP13.14□□□□□ -0.31
TRIM56-201ENST00000306085 TSHRP16473 764 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 CXCR1P25024 350 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 LEPRP48357 1165 aaKnown RBP13.14□□□□□ -0.31
TRIM56-201ENST00000306085 SCNN1GP51170 649 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 NCBP2P52298 156 aaKnown RBP eCLIP13.14□□□□□ -0.31
TRIM56-201ENST00000306085 FAM174BQ3ZCQ3 159 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 AKR1C8PQ5T2L2 129 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 CLEC17AQ6ZS10 378 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 GPAT4Q86UL3 456 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 MARCH9Q86YJ5 346 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
TRIM56-201ENST00000306085 EBNA1BP2Q99848 306 aaKnown RBP13.14□□□□□ -0.31
TRIM56-201ENST00000306085 TLR10Q9BXR5 811 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 RTFDC1Q9BY42 306 aaPredicted RBP13.14□□□□□ -0.31
TRIM56-201ENST00000306085 CALML5Q9NZT1 146 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 SIRPGQ9P1W8 387 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 SLC27A5Q9Y2P5 690 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 SAP18O00422 153 aaKnown RBP13.14□□□□□ -0.31
TRIM56-201ENST00000306085 GMDSO60547 372 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 FOXO4P98177 505 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 METTL3Q86U44 580 aaKnown RBP13.14□□□□□ -0.31
TRIM56-201ENST00000306085 DCAKDQ8WVC6 231 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 TRAPPC12Q8WVT3 735 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 SENP8Q96LD8 212 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 TIMM22Q9Y584 194 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 CRISP1P54107 249 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 TAS2R39P59534 338 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 RNF4P78317 190 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 SAMD7Q7Z3H4 446 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 NETO2Q8NC67 525 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 SLC30A2Q9BRI3 323 aa13.14□□□□□ -0.31
TRIM56-201ENST00000306085 NDC1Q9BTX1 674 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms