RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 PTTG1O95997 202 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 F11P03951 625 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 ARSAP15289 507 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 CCNCP24863 283 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 DNAJB1P25685 340 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 PTPN3P26045 913 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 RRM2P31350 389 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 ACVRL1P37023 503 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 ALDH3A2P51648 485 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 OLIG2Q13516 323 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 NPTX1Q15818 432 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 RABL3Q5HYI8 236 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 ATAD3CQ5T2N8 411 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 ZNF470Q6ECI4 717 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 NUDT18Q6ZVK8 323 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 BHLHA9Q7RTU4 235 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 GALNT5Q7Z7M9 940 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 LGALS12Q96DT0 336 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 SLC46A2Q9BY10 475 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 POLR1EQ9GZS1 481 aaKnown RBP10.68□□□□□ -0.7
LSM3-201ENST00000306024 LMAN2LQ9H0V9 348 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 MAGEH1Q9H213 219 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 SCUBE2Q9NQ36 999 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 MAT2BQ9NZL9 334 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 SLC25A13Q9UJS0 675 aa10.68□□□□□ -0.7
LSM3-201ENST00000306024 UMPSP11172 480 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 HGFP14210 728 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 PAMP19021 973 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 CRHBPP24387 322 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 DDX6P26196 483 aaKnown RBP eCLIP10.67□□□□□ -0.7
LSM3-201ENST00000306024 CD86P42081 329 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 CLCN4P51793 760 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 KCNC4Q03721 635 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 FOXD4Q12950 439 aaPredicted RBP10.67□□□□□ -0.7
LSM3-201ENST00000306024 STEAP3Q658P3 488 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 FAM45BPQ6NSW5 357 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 GALNT13Q8IUC8 556 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 CELF2-AS1Q8N7Q2 184 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 PIK3C3Q8NEB9 887 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 FAM45AQ8TCE6 357 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 SP7Q8TDD2 431 aaPredicted RBP10.67□□□□□ -0.7
LSM3-201ENST00000306024 STON2Q8WXE9 905 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 NACC2Q96BF6 587 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 SLC39A13Q96H72 371 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 SNX18Q96RF0 628 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 NSUN3Q9H649 340 aaKnown RBP10.67□□□□□ -0.7
LSM3-201ENST00000306024 MID1IP1Q9NPA3 183 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 DZANK1Q9NVP4 752 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 DNMT3BQ9UBC3 853 aaKnown RBP10.67□□□□□ -0.7
LSM3-201ENST00000306024 IRAK3Q9Y616 596 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 CCDC182A6NF36 153 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 BCKDKO14874 412 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 CCT3P49368 545 aaKnown RBP10.67□□□□□ -0.7
LSM3-201ENST00000306024 RAB10P61026 200 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 IFITM3Q01628 133 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 RUNX1T1Q06455 604 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 ADGRG5Q8IZF4 528 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 BLOC1S5Q8TDH9 187 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 PMEPA1Q969W9 287 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 CSF3RQ99062 836 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 C14orf119Q9NWQ9 140 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 TMEM181Q9P2C4 612 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 PCDHGA10Q9Y5H3 936 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 HNRNPCL2B2RXH8 293 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 MATN3O15232 486 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 RGS10O43665 173 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 MSL3P1P0C860 447 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 AGXTP21549 392 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 CES1P23141 567 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 SLC15A1P46059 708 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 GALNT2Q10471 571 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 POU6F1Q14863 301 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 ATP6AP1LQ52LC2 224 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 ADGRD2Q7Z7M1 963 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 MRPL57Q9BQC6 102 aaKnown RBP10.67□□□□□ -0.7
LSM3-201ENST00000306024 UGT2B28Q9BY64 529 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 RHOJQ9H4E5 214 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 ZNF576Q9H609 170 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 GLOD4Q9HC38 313 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 ZFP14Q9HCL3 533 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 NECTIN3Q9NQS3 549 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 DIABLOQ9NR28 239 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 TAS2R9Q9NYW1 312 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 BTRCQ9Y297 605 aa10.67□□□□□ -0.7
LSM3-201ENST00000306024 H3BMM5 538 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 J3KR12 359 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 DMC1Q14565 340 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 TCEAL5Q5H9L2 206 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 LYSMD2Q8IV50 215 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 KDM1BQ8NB78 822 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 PPHLN1Q8NEY8 458 aaKnown RBP10.66□□□□□ -0.7
LSM3-201ENST00000306024 KBTBD8Q8NFY9 601 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 SPATA22Q8NHS9 363 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 BIRC7Q96CA5 298 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 LRRC58Q96CX6 371 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 C19orf60Q96EN9 201 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 RIPOR3Q96MK2 946 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 KLF16Q9BXK1 252 aaPredicted RBP10.66□□□□□ -0.7
LSM3-201ENST00000306024 RASSF1Q9NS23 344 aa10.66□□□□□ -0.7
LSM3-201ENST00000306024 ZMYM5Q9UJ78 669 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms