RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 GRIA3P42263 894 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 KRT6CP48668 564 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 GSK3BP49841 420 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 CHIT1Q13231 466 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 SELPLGQ14242 412 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 SYTL3Q4VX76 610 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 RAET1GQ6H3X3 334 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 DENND4AQ7Z401 1863 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 SPPL2CQ8IUH8 684 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 SELENOMQ8WWX9 145 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 LRTOMTQ8WZ04 291 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 SUSD6Q92537 303 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 ZUFSPQ96AP4 578 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 MRPL38Q96DV4 380 aaKnown RBP6.37□□□□□ -1.39
USP47-201ENST00000305481 LRGUKQ96M69 825 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 HDAC8Q9BY41 377 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 C1orf109Q9NX04 203 aa6.37□□□□□ -1.39
USP47-201ENST00000305481 ZNF839A8K0R7 811 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 E7EQ34 232 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 LZTS3O60299 673 aaPredicted RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 ZNF8P17098 575 aaPredicted RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 PSMC3P17980 439 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 TACR1P25103 407 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 IMPA1P29218 277 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 SLC7A1P30825 629 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 WASP42768 502 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 GPR1P46091 355 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 SOX9P48436 509 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 TAS2R38P59533 333 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 PHC1P78364 1004 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 PLIN5Q00G26 463 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 LIPEQ05469 1076 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 DLX2Q07687 328 aaPredicted RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 GRAMD1BQ3KR37 738 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 HMBOX1Q6NT76 420 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 IRGCQ6NXR0 463 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 AGTRAPQ6RW13 159 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 C11orf96Q7Z7L8 435 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 THOC6Q86W42 341 aaKnown RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 TMEM126BQ8IUX1 230 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 CFAP206Q8IYR0 622 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 AADATQ8N5Z0 425 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 LMNTD1Q8N9Z9 388 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 OR2T34Q8NGX1 318 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 OR2T3Q8NH03 318 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 CLHC1Q8NHS4 586 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 CANT1Q8WVQ1 401 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 EZH1Q92800 747 aaPredicted RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 APIPQ96GX9 242 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 PPP1R16AQ96I34 528 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 UHRF1Q96T88 793 aaPredicted RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 ALG2Q9H553 416 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 CLMPQ9H6B4 373 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 TRIM39Q9HCM9 518 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 CLEC1BQ9P126 229 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 EIF3LQ9Y262 564 aaKnown RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 DYTNA2CJ06 578 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 GRXCR2A6NFK2 248 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 ARPC2O15144 300 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 RNASEH1O60930 286 aaKnown RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 NPPAP01160 153 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 MTHFD1P11586 935 aaKnown RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 PRPH2P23942 346 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 KLC1Q07866 573 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 NAE1Q13564 534 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 ENPP2Q13822 863 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 FXNQ16595 210 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 IMPG1Q17R60 797 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 MAP7D1Q3KQU3 841 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 FAM174BQ3ZCQ3 159 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 SPANXN4Q5MJ08 99 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 FRG2Q64ET8 278 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 ADNP2Q6IQ32 1131 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 LCN8Q6JVE9 175 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 RALGPS2Q86X27 583 aaPredicted RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 CACUL1Q86Y37 369 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 PTRH1Q86Y79 214 aaKnown RBP6.36□□□□□ -1.39
USP47-201ENST00000305481 HID1Q8IV36 788 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 KLHDC8AQ8IYD2 350 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 OR56A3Q8NH54 315 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 GTF2H4Q92759 462 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 CCDC138Q96M89 665 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 PPM1MQ96MI6 270 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 FRG2BQ96QU4 278 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 S1PR5Q9H228 398 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 SEMA6AQ9H2E6 1030 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 ELOVL6Q9H5J4 265 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 PIF1Q9H611 641 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 SLC28A3Q9HAS3 691 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 ACTR3BQ9P1U1 418 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 SERGEFQ9UGK8 458 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 SNX6Q9UNH7 406 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 TMEM98Q9Y2Y6 226 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 DTNAQ9Y4J8 743 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 STON1Q9Y6Q2 735 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 PRUNE2Q8WUY3 3088 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 SERTM1A2A2V5 107 aa6.36□□□□□ -1.39
USP47-201ENST00000305481 NPIPB8E9PQR5 432 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms