RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 KLC3Q6P597 504 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 AGTRAPQ6RW13 159 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 RPS27LQ71UM5 84 aaKnown RBP9.19□□□□□ -0.94
RFX3-201ENST00000302303 TMPRSS9Q7Z410 1059 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 C10orf107Q8IVU9 208 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 C2orf73Q8N5S3 287 aaPredicted RBP9.19□□□□□ -0.94
RFX3-201ENST00000302303 OR4E2Q8NGC2 313 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 PYCR2Q96C36 320 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 SCYL1Q96KG9 808 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 FOPNLQ96NB1 174 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 SGPP1Q9BX95 441 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 C1QTNF3Q9BXJ4 246 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 PITPNM3Q9BZ71 974 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 ATG10Q9H0Y0 220 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 ACBD3Q9H3P7 528 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 ZBTB26Q9HCK0 441 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 MLXIPLQ9NP71 852 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 KCNK9Q9NPC2 374 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 OXSMQ9NWU1 459 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 TOR4AQ9NXH8 423 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 ARL15Q9NXU5 204 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 NUDT4Q9NZJ9 180 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 SH2B3Q9UQQ2 575 aa9.19□□□□□ -0.94
RFX3-201ENST00000302303 RIF1Q5UIP0 2472 aaKnown RBP9.19□□□□□ -0.94
RFX3-201ENST00000302303 DCHS1Q96JQ0 3298 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 ANKRD12Q6UB98 2062 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 IGHV1OR21-1A0A087WYE8 117 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 A0A1B0GTL3 188 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 A0A1W2PQM1 296 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 LILRA5A6NI73 299 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 E2F3O00716 465 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 PPP6CO00743 305 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 ZWINTO95229 277 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 BPGMP07738 259 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 ALPPL2P10696 532 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 FGF3P11487 239 aaPredicted RBP9.18□□□□□ -0.94
RFX3-201ENST00000302303 PNLIPP16233 465 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 NPPBP16860 134 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 ATP5F1P24539 256 aaPredicted RBP9.18□□□□□ -0.94
RFX3-201ENST00000302303 CD1CP29017 333 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 HPDP32754 393 aaPredicted RBP9.18□□□□□ -0.94
RFX3-201ENST00000302303 LSSP48449 732 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 SERPINB4P48594 390 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 RAB28P51157 221 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 PNLIPRP1P54315 467 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 PRKAA2P54646 552 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 ALDH18A1P54886 795 aaKnown RBP9.18□□□□□ -0.94
RFX3-201ENST00000302303 OR1D5P58170 312 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 PPP1CAP62136 330 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 PPP2R2AP63151 447 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 SQSTM1Q13501 440 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 ARHGAP19Q14CB8 494 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 SUZ12Q15022 739 aaKnown RBP9.18□□□□□ -0.94
RFX3-201ENST00000302303 PCBP2Q15366 365 aaKnown RBP eCLIP9.18□□□□□ -0.942e-6■■■□□ 16
RFX3-201ENST00000302303 NR0B2Q15466 257 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 PFKFB4Q16877 469 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 AASDHQ4L235 1098 aaPredicted RBP9.18□□□□□ -0.94
RFX3-201ENST00000302303 UNC50Q53HI1 259 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 FAM219BQ5XKK7 198 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 SULT1C3Q6IMI6 304 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 SUSD1Q6UWL2 747 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 AMIGO1Q86WK6 493 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 NAXDQ8IW45 347 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 RBM12BQ8IXT5 1001 aaKnown RBP9.18□□□□□ -0.94
RFX3-201ENST00000302303 PTGR2Q8N8N7 351 aaPredicted RBP9.18□□□□□ -0.94
RFX3-201ENST00000302303 OR2A1Q8NGT9 310 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 OR2L8Q8NGY9 312 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 RDH11Q8TC12 318 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 MAGEC3Q8TD91 643 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 RHBDD1Q8TEB9 315 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 UBTD2Q8WUN7 234 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 RSC1A1Q92681 617 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 EXT2Q93063 718 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 CCDC74AQ96AQ1 378 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 PHF21BQ96EK2 531 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 PPM1MQ96MI6 270 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 NSUN5Q96P11 429 aaKnown RBP9.18□□□□□ -0.94
RFX3-201ENST00000302303 TMEM237Q96Q45 408 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 CD244Q9BZW8 370 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 CD274Q9NZQ7 290 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 SPATA7Q9P0W8 599 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 GVINP1Q7Z2Y8 2422 aa9.18□□□□□ -0.94
RFX3-201ENST00000302303 COL27A1Q8IZC6 1860 aaPredicted RBP9.18□□□□□ -0.94
RFX3-201ENST00000302303 IGKV1-8A0A0C4DH67 115 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.17□□□□□ -0.94
RFX3-201ENST00000302303 OR6C74A6NCV1 312 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 SYCE1LA8MT33 242 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 SUPT3HB4E1H0 165 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 STX16-NPEPL1H3BU86 382 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 STX16O14662 325 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 FOXD2O60548 495 aaPredicted RBP9.17□□□□□ -0.94
RFX3-201ENST00000302303 SUPT3HO75486 399 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 IPO13O94829 963 aaKnown RBP9.17□□□□□ -0.94
RFX3-201ENST00000302303 RPN2P04844 631 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 RPS17P08708 135 aaKnown RBP9.17□□□□□ -0.94
RFX3-201ENST00000302303 ANXA5P08758 320 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 CHRM5P08912 532 aaPredicted RBP9.17□□□□□ -0.94
RFX3-201ENST00000302303 CHN1P15882 459 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 CKMT2P17540 419 aa9.17□□□□□ -0.94
RFX3-201ENST00000302303 NR1D1P20393 614 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms