RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 TPD52L3Q96J77 140 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 ZNF583Q96ND8 569 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 CDT1Q9H211 546 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 AS3MTQ9HBK9 375 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 DICER1Q9UPY3 1922 aaKnown RBP14.1□□□□□ -0.15
CDT1-201ENST00000301019 TSPAN1O60635 241 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 PAPSS2O95340 614 aaPredicted RBP14.1□□□□□ -0.15
CDT1-201ENST00000301019 SYPP08247 313 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 CNPP09543 421 aaKnown RBP14.1□□□□□ -0.15
CDT1-201ENST00000301019 SOX3P41225 446 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 ABATP80404 500 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 NR6A1Q15406 480 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 SETMARQ53H47 684 aaPredicted RBP14.1□□□□□ -0.15
CDT1-201ENST00000301019 KIAA1324Q6UXG2 1013 aaKnown RBP14.1□□□□□ -0.15
CDT1-201ENST00000301019 ANKS3Q6ZW76 656 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 PAPD5Q8NDF8 572 aaKnown RBP14.1□□□□□ -0.15
CDT1-201ENST00000301019 PPHLN1Q8NEY8 458 aaKnown RBP14.1□□□□□ -0.15
CDT1-201ENST00000301019 PROKR1Q8TCW9 393 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 ZNF675Q8TD23 568 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 AFG1LQ8WV93 481 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 ZNF419Q96HQ0 510 aaPredicted RBP14.1□□□□□ -0.15
CDT1-201ENST00000301019 UGT2B28Q9BY64 529 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 ERVMER34-1Q9H9K5 563 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 SLC6A13Q9NSD5 602 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 CACNG4Q9UBN1 327 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 MAGEL2Q9UJ55 1249 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 FZD10Q9ULW2 581 aa14.1□□□□□ -0.15
CDT1-201ENST00000301019 CXCR6O00574 342 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 PRIM2P49643 509 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 ARSDP51689 593 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 MLLT6P55198 1093 aaPredicted RBP14.09□□□□□ -0.15
CDT1-201ENST00000301019 RPP38P78345 283 aaKnown RBP14.09□□□□□ -0.15
CDT1-201ENST00000301019 NBPF12Q5TAG4 269 aaPredicted RBP14.09□□□□□ -0.15
CDT1-201ENST00000301019 CACHD1Q5VU97 1274 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 ABHD15Q6UXT9 468 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 LIPIQ6XZB0 460 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 TMPRSS11AQ6ZMR5 421 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 DPP9Q86TI2 863 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 KRTCAP2Q8N6L1 136 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 USP7Q93009 1102 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 FRMD6Q96NE9 622 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 DPCDQ9BVM2 203 aaPredicted RBP14.09□□□□□ -0.15
CDT1-201ENST00000301019 EIF2B3Q9NR50 452 aaKnown RBP14.09□□□□□ -0.15
CDT1-201ENST00000301019 RGS18Q9NS28 235 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 KRT84Q9NSB2 600 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 USP3Q9Y6I4 520 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 RFXAPO00287 272 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 SUPT20HL2P0C7V6 817 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 SOX6P35712 828 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 ARL2P36404 184 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 MGAT3Q09327 533 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 C2orf80Q0P641 193 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 DDR2Q16832 855 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 SUPT20HL1Q3ZLR7 823 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 GNASQ5JWF2 1037 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 ARSKQ6UWY0 536 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 PROSER1Q86XN7 944 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 PHYKPLQ8IUZ5 450 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 ADHFE1Q8IWW8 467 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 OR52B6Q8NGF0 335 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 CDC26Q8NHZ8 85 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 FDXACB1Q9BRP7 624 aaPredicted RBP14.09□□□□□ -0.15
CDT1-201ENST00000301019 BCO2Q9BYV7 579 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 DUSP21Q9H596 190 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 PDPK1O15530 556 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 HRGP04196 525 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 TNFRSF1BP20333 461 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 HERVK_113P63132 956 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 RCAN2Q14206 197 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 VEPH1Q14D04 833 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 FAM174BQ3ZCQ3 159 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 PRAMEF18Q5VWM3 479 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 TMEM65Q6PI78 240 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 IL27RAQ6UWB1 636 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 FAM160B2Q86V87 743 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 APOBEC3FQ8IUX4 373 aaKnown RBP14.09□□□□□ -0.15
CDT1-201ENST00000301019 ZDHHC21Q8IVQ6 265 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 ZBTB8OSQ8IWT0 167 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 ASB12Q8WXK4 309 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 TBL1YQ9BQ87 522 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 ERVK-6Q9BXR3 956 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 TRIM45Q9H8W5 580 aaPredicted RBP14.09□□□□□ -0.15
CDT1-201ENST00000301019 CD274Q9NZQ7 290 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 FEM1BQ9UK73 627 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 SAMHD1Q9Y3Z3 626 aaKnown RBP14.09□□□□□ -0.15
CDT1-201ENST00000301019 PEX16Q9Y5Y5 336 aa14.09□□□□□ -0.15
CDT1-201ENST00000301019 ZNF638Q14966 1978 aaKnown RBP14.08□□□□□ -0.15
CDT1-201ENST00000301019 LOC102723532A0A0G2JNH3 316 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 TLR5O60602 858 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 BEST1O76090 585 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 SLITRK5O94991 958 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 HTR1EP28566 365 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 KPNA2P52292 529 aaKnown RBP14.08□□□□□ -0.16
CDT1-201ENST00000301019 ARHGDIBP52566 201 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 RPL6Q02878 288 aaKnown RBP14.08□□□□□ -0.16
CDT1-201ENST00000301019 PRKG2Q13237 762 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 PCBP1Q15365 356 aaKnown RBP eCLIP14.08□□□□□ -0.162e-6■■□□□ 13.9
CDT1-201ENST00000301019 TSNQ15631 228 aaKnown RBP14.08□□□□□ -0.16
CDT1-201ENST00000301019 ZNF284Q2VY69 593 aa14.08□□□□□ -0.16
CDT1-201ENST00000301019 USP39Q53GS9 565 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms