RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 EPHA6Q9UF33 1036 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 SAMD4AQ9UPU9 718 aaKnown RBP8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 TMEM98Q9Y2Y6 226 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 C17orf113A0A1B0GUU1 675 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 FAM221BA6H8Z2 402 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 NPIPB15A6NHN6 443 aaPredicted RBP8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 TMX2-CTNND1H3BSU7 103 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 H7C0S8 307 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 ERN1O75460 977 aaKnown RBP8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 RFPL1O75677 317 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 OLFM2O95897 454 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 JUNDP17535 347 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 SLC6A2P23975 617 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 RFX3P48380 749 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 TNK2Q07912 1038 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 ADAM15Q13444 863 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 ADRM1Q16186 407 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 PTCHD3Q3KNS1 767 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 C9orf64Q5T6V5 341 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 ZNF544Q6NX49 715 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 ZNF781Q8N8C0 355 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 SETD9Q8NE22 299 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 OR2A12Q8NGT7 310 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 TSSK3Q96PN8 268 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 SLC22A12Q96S37 553 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 APOOQ9BUR5 198 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 TXLNGYQ9BZA5 131 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 EPHX3Q9H6B9 360 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 RDH14Q9HBH5 336 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 DDX18Q9NVP1 670 aaKnown RBP8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 SERTAD3Q9UJW9 196 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 ITM2BQ9Y287 266 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 SMCHD1A6NHR9 2005 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 CDC7O00311 574 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 HTRA2O43464 458 aaPredicted RBP8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 LDB2O43679 373 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 DFNA5O60443 496 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 UGDHO60701 494 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 THEGLP0DJG4 465 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 CPN2P22792 545 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 RCN1Q15293 331 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 TYSND1Q2T9J0 566 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 AFMIDQ63HM1 303 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 KIAA0895LQ68EN5 471 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 KCTD11Q693B1 232 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 PSAPL1Q6NUJ1 521 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 AAGABQ6PD74 315 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 DNAJC14Q6Y2X3 702 aaPredicted RBP8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 FAM92BQ6ZTR7 304 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 GOLGA7Q7Z5G4 137 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 CLNKQ7Z7G1 428 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 PGAM4Q8N0Y7 254 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 ADAMTS15Q8TE58 950 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 DNAJC9Q8WXX5 260 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 COL26A1Q96A83 441 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 EPB41L1Q9H4G0 881 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 IL26Q9NPH9 171 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 SIRPGQ9P1W8 387 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 NCDNQ9UBB6 729 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 TIMM22Q9Y584 194 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 SNX13Q9Y5W8 968 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 TRBV23OR9-2A0A075B6M9 112 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 ATP6AP2A0A1C7CYW4 349 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 DUXAA6NLW8 204 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 AP1G1O43747 822 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 ATP6AP2O75787 350 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 PDHA1P08559 390 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 JAK1P23458 1154 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 ADARP55265 1226 aaKnown RBP8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 CYP4F2P78329 520 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 SMU1Q2TAY7 513 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 TIGD2Q4W5G0 525 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 ZNF678Q5SXM1 525 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 EGFLAMQ63HQ2 1017 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 SCIMPQ6UWF3 145 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 DEFB123Q8N688 67 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 PELOQ9BRX2 385 aaKnown RBP8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 DUSP23Q9BVJ7 150 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 SLC12A9Q9BXP2 914 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 REEP1Q9H902 201 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 TMEM45AQ9NWC5 275 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 COQ6Q9Y2Z9 468 aa8.1□□□□□ -1.11
SNRPD1-201ENST00000300413 PDPK1O15530 556 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 TYROBPO43914 113 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 PCDH7O60245 1069 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 SH3BGRLO75368 114 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 RSL1D1O76021 490 aaKnown RBP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 CBX6O95503 412 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 NPPAP01160 153 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 CSTF2P33240 577 aaKnown RBP eCLIP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 CTSOP43234 321 aaPredicted RBP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 SLC6A11P48066 632 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 WDR4P57081 412 aaKnown RBP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 TXNL4AP83876 142 aaKnown RBP8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 FOXM1Q08050 763 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 OLIG2Q13516 323 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 SNAP47Q5SQN1 464 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 TP53INP2Q8IXH6 220 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 C10orf53Q8N6V4 93 aa8.09□□□□□ -1.11
SNRPD1-201ENST00000300413 DDHD1Q8NEL9 900 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms