RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SMU1Q2TAY7 513 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 COQ5Q5HYK3 327 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 CEP78Q5JTW2 689 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 PTRH1Q86Y79 214 aaKnown RBP13.15□□□□□ -0.3
CTDP1-202ENST00000299543 TTC30BQ8N4P2 665 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 NATD1Q8N6N6 113 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 SH3YL1Q96HL8 342 aaPredicted RBP13.15□□□□□ -0.3
CTDP1-202ENST00000299543 HOXD1Q9GZZ0 328 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 RAD21L1Q9H4I0 556 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 NTN4Q9HB63 628 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 ZFYVE1Q9HBF4 777 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 ELOVL2Q9NXB9 296 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 COQ3Q9NZJ6 369 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 NUDT4Q9NZJ9 180 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 IL17CQ9P0M4 197 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 SLCO3A1Q9UIG8 710 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 TNPO3Q9Y5L0 923 aaKnown RBP13.15□□□□□ -0.3
CTDP1-202ENST00000299543 PTPRDP23468 1912 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 TMEM88BA6NKF7 163 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 GALTP07902 379 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 RAP2AP10114 183 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 EFNA1P20827 205 aaPredicted RBP13.15□□□□□ -0.3
CTDP1-202ENST00000299543 PHC1P78364 1004 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 CACNG1Q06432 222 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 PWP1Q13610 501 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 CRY1Q16526 586 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 TMEM236Q5W0B7 351 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 SBSNQ6UWP8 590 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 ANKS3Q6ZW76 656 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 R3HCC1LQ7Z5L2 792 aaKnown RBP13.15□□□□□ -0.3
CTDP1-202ENST00000299543 TSPEARQ8WU66 669 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 ZNF486Q96H40 463 aaPredicted RBP13.15□□□□□ -0.3
CTDP1-202ENST00000299543 DMRTB1Q96MA1 342 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 ZNF583Q96ND8 569 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 ATP13A3Q9H7F0 1226 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 IFT52Q9Y366 437 aa13.15□□□□□ -0.3
CTDP1-202ENST00000299543 NLRC5Q86WI3 1866 aa13.15□□□□□ -0.31
CTDP1-202ENST00000299543 MYO1GB0I1T2 1018 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 TMEM189-UBE2V1I3L0A0 370 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 RGS14O43566 566 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 ASNA1O43681 348 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 ZNF682O95780 498 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 CYP4B1P13584 511 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 PRKACBP22694 351 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 CSKP41240 450 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 ALDH7A1P49419 539 aaKnown RBP13.14□□□□□ -0.31
CTDP1-202ENST00000299543 HSPA14Q0VDF9 509 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 MRPL58Q14197 206 aaKnown RBP13.14□□□□□ -0.31
CTDP1-202ENST00000299543 SNAP47Q5SQN1 464 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.14□□□□□ -0.31
CTDP1-202ENST00000299543 SULT1C3Q6IMI6 304 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 SPATC1Q76KD6 591 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 ADGRG2Q8IZP9 1017 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 BCL7CQ8WUZ0 217 aaPredicted RBP13.14□□□□□ -0.31
CTDP1-202ENST00000299543 NACC2Q96BF6 587 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 SLC47A1Q96FL8 570 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 ASIC4Q96FT7 647 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 SLC22A12Q96S37 553 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 PTBP2Q9UKA9 531 aaKnown RBP13.14□□□□□ -0.31
CTDP1-202ENST00000299543 MYO7AQ13402 2215 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 HOXC11O43248 304 aaPredicted RBP13.14□□□□□ -0.31
CTDP1-202ENST00000299543 TBC1D4O60343 1298 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 SPNP16150 400 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 TGFBR1P36897 503 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 CYP4F3Q08477 520 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 CACHD1Q5VU97 1274 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 DEFB128Q7Z7B8 93 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 GALNT10Q86SR1 603 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 AKAP14Q86UN6 197 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 RGL4Q8IZJ4 473 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 C8orf59Q8N0T1 100 aaPredicted RBP13.14□□□□□ -0.31
CTDP1-202ENST00000299543 ZNF555Q8NEP9 628 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 WFDC5Q8TCV5 224 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 SCLYQ96I15 445 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 LHPPQ9H008 270 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 ANKMY1Q9P2S6 941 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 PCDHB3Q9Y5E6 796 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 TET1Q8NFU7 2136 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 H7C4K7 107 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 M0R3G1 203 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 SNPHO15079 494 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 TMCC2O75069 709 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 DIRAS1O95057 198 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 SEC24AO95486 1093 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 F11P03951 625 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 PRKCAP17252 672 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 ITGALP20701 1170 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 TGM1P22735 817 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 ALDH3A2P51648 485 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 NKG7Q16617 165 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 LRIT3Q3SXY7 679 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 CXorf57Q6NSI4 855 aaKnown RBP13.14□□□□□ -0.31
CTDP1-202ENST00000299543 STK40Q8N2I9 435 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 FRS2Q8WU20 508 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 FAM120BQ96EK7 910 aaKnown RBP13.14□□□□□ -0.31
CTDP1-202ENST00000299543 NRBF2Q96F24 287 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 MYO19Q96H55 970 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 PPP3R2Q96LZ3 170 aa13.14□□□□□ -0.31
CTDP1-202ENST00000299543 BBS2Q9BXC9 721 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms