RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ACTR3BQ9P1U1 418 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 SLC17A6Q9P2U8 582 aa12.52□□□□□ -0.4
PTCD1-201ENST00000292478 FAM240BA0A1B0GVZ2 78 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 A0A1W2PRU2 124 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 FAM189A1O60320 539 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 ACVRL1P37023 503 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 MYBPC3Q14896 1274 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 DUOXA1Q1HG43 343 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 FAM91A1Q658Y4 838 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 CADM2Q8N3J6 435 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 AVL9Q8NBF6 648 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 OR4C6Q8NH72 309 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 SEC14L1Q92503 715 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 CRELD1Q96HD1 420 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 DIRAS2Q96HU8 199 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 SLC2A13Q96QE2 648 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 PEBP4Q96S96 227 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 RIOK2Q9BVS4 552 aaKnown RBP12.52□□□□□ -0.41
PTCD1-201ENST00000292478 WDR26Q9H7D7 661 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 TRPV5Q9NQA5 729 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 FARSBQ9NSD9 589 aaKnown RBP12.52□□□□□ -0.41
PTCD1-201ENST00000292478 OSER1Q9NX31 292 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 MKS1Q9NXB0 559 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 IKZF2Q9UKS7 526 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 PCDHGB7Q9Y5F8 929 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 NUP188Q5SRE5 1749 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 MT-ND1P03886 318 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 PGRP06401 933 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 IL18R1Q13478 541 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 SLBPQ14493 270 aaKnown RBP eCLIP12.52□□□□□ -0.41
PTCD1-201ENST00000292478 ARSIQ5FYB1 569 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 PRAMEF14Q5SWL7 426 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 PRAMEF13Q5VWM6 474 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 CYS1Q717R9 158 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 GAS2L1Q99501 681 aaPredicted RBP12.52□□□□□ -0.41
PTCD1-201ENST00000292478 COPS4Q9BT78 406 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 GKN1Q9NS71 199 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 KDM3BQ7LBC6 1761 aa12.52□□□□□ -0.41
PTCD1-201ENST00000292478 PLOD3O60568 738 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 ADH5P11766 374 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 CSNK2A2P19784 350 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-201ENST00000292478 GSTM3P21266 225 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 C10orf62Q5T681 223 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-201ENST00000292478 ZCCHC12Q6PEW1 402 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 TAS1R3Q7RTX0 852 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 PARP8Q8N3A8 854 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 CHCHD4Q8N4Q1 142 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 COX18Q8N8Q8 333 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 CYP2S1Q96SQ9 504 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 UPK3BL1B0FP48 263 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 C9IYK1 514 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 UPK3BL2E5RIL1 263 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 CLIC1O00299 241 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 KLHL18O94889 574 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 CYP11A1P05108 521 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 MVKQ03426 396 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 FAM129CQ86XR2 697 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 GLIS1Q8NBF1 620 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 GEMIN6Q8WXD5 167 aaKnown RBP12.51□□□□□ -0.41
PTCD1-201ENST00000292478 NR4A3Q92570 626 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 UFD1Q92890 307 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 GTPBP3Q969Y2 492 aaKnown RBP12.51□□□□□ -0.41
PTCD1-201ENST00000292478 MTERF1Q99551 399 aaKnown RBP12.51□□□□□ -0.41
PTCD1-201ENST00000292478 XYLT2Q9H1B5 865 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 ELL3Q9HB65 397 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-201ENST00000292478 MCUBQ9NWR8 336 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 TELO2Q9Y4R8 837 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 OAS3Q9Y6K5 1087 aaKnown RBP12.51□□□□□ -0.41
PTCD1-201ENST00000292478 A0A1W2PP18 115 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 RHPN2P1A8MT19 583 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 HMGN1P05114 100 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 C8BP07358 591 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 PFKMP08237 780 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 EMX2Q04743 252 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 SEMA3AQ14563 771 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 PCLAFQ15004 111 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 TYSND1Q2T9J0 566 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 LRRTM4Q86VH4 590 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 PJA1Q8NG27 643 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 TRIB3Q96RU7 358 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 TAPBPLQ9BX59 468 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 DSN1Q9H410 356 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 FAM120CQ9NX05 1096 aaKnown RBP12.51□□□□□ -0.41
PTCD1-201ENST00000292478 MOCS1Q9NZB8 636 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 P2RX2Q9UBL9 471 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 MANBAO00462 879 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 REM1O75628 298 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 UGT1A6P19224 532 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 UGT1A1P22309 533 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 UGT1A4P22310 534 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 UGT1A3P35503 534 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 NOVP48745 357 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 DSTNP60981 165 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 TRIM32Q13049 653 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 IQCCQ4KMZ1 466 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 EGFLAMQ63HQ2 1017 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 TMEM198Q66K66 360 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 USP30Q70CQ3 517 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 MINDY2Q8NBR6 621 aa12.51□□□□□ -0.41
PTCD1-201ENST00000292478 KCNJ9Q92806 393 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms