RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 CBSP35520 551 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 IGFALSP35858 605 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 DPP6P42658 865 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 TPMTP51580 245 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 PFN3P60673 137 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 UFM1P61960 85 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 CCINQ13939 588 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 RPS6KA2Q15349 733 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 NR6A1Q15406 480 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 ZNF542PQ5EBM4 170 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 TLDC1Q6P9B6 456 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 AGTRAPQ6RW13 159 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 FAM20CQ8IXL6 584 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 OR4K3Q96R72 315 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 CCDC28BQ9BUN5 200 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 C1QTNF3Q9BXJ4 246 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 EBF2Q9HAK2 575 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 NKX1-2Q9UD57 310 aaPredicted RBP10.68□□□□□ -0.7
GGPS1-201ENST00000282841 ZNF490Q9ULM2 529 aaPredicted RBP10.68□□□□□ -0.7
GGPS1-201ENST00000282841 ASF1AQ9Y294 204 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 GPSM3Q9Y4H4 160 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 TNPO3Q9Y5L0 923 aaKnown RBP10.68□□□□□ -0.7
GGPS1-201ENST00000282841 TDRD6O60522 2096 aaKnown RBP10.68□□□□□ -0.7
GGPS1-201ENST00000282841 A0A1B0GVG6 124 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 ARHGAP10A1A4S6 786 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 OR52A4PA6NMU1 304 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 ATP6V1G2O95670 118 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 GABRG2P18507 467 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 INHBCP55103 352 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 ILF2Q12905 390 aaKnown RBP10.68□□□□□ -0.7
GGPS1-201ENST00000282841 SMAD4Q13485 552 aaKnown RBP10.68□□□□□ -0.7
GGPS1-201ENST00000282841 METTL21CQ5VZV1 264 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 CWF19L1Q69YN2 538 aaKnown RBP10.68□□□□□ -0.7
GGPS1-201ENST00000282841 ULK2Q8IYT8 1036 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 TP53I13Q8NBR0 393 aaPredicted RBP10.68□□□□□ -0.7
GGPS1-201ENST00000282841 DTX3LQ8TDB6 740 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 ACTRT2Q8TDY3 377 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 HLA-CQ95604 372 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 FAR2Q96K12 515 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 HHIPQ96QV1 700 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 MTERF1Q99551 399 aaKnown RBP10.68□□□□□ -0.7
GGPS1-201ENST00000282841 STOX2Q9P2F5 926 aaPredicted RBP10.68□□□□□ -0.7
GGPS1-201ENST00000282841 NFKBIL1Q9UBC1 381 aaPredicted RBP10.68□□□□□ -0.7
GGPS1-201ENST00000282841 SLC7A8Q9UHI5 535 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 CYP8B1Q9UNU6 501 aa10.68□□□□□ -0.7
GGPS1-201ENST00000282841 A0A088AWK7 358 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 FBP2O00757 339 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 NPC1O15118 1278 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 PLRG1O43660 514 aaKnown RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 E2F6O75461 281 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 OTCP00480 354 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 C8GP07360 202 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 MYCLP1P12525 358 aaPredicted RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 CD22P20273 847 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 DRD1P21728 446 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 IMPA1P29218 277 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 CLCNKAP51800 687 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 RPS21P63220 83 aaKnown RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 PTGR1Q14914 329 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 UBXN2BQ14CS0 331 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 C6orf136Q5SQH8 315 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 AMZ2Q86W34 360 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 CCL4L1Q8NHW4 92 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 TSACCQ96A04 125 aaPredicted RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 SLC32A1Q9H598 525 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 PNMA8BQ9ULN7 279 aaPredicted RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 STK25O00506 426 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 C1orf105O95561 183 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 CHEK2O96017 543 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 PDYNP01213 254 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 GSTM1P09488 218 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 SLC2A4P14672 509 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 GNPDA1P46926 289 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 TRPC1P48995 793 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 RPL38P63173 70 aaKnown RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 GSTM4Q03013 218 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 CHIT1Q13231 466 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 GAS6Q14393 721 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 MMEL1Q495T6 779 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 CATSPEREQ5SY80 951 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 FAM91A1Q658Y4 838 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 CHSY3Q70JA7 882 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 THOC6Q86W42 341 aaKnown RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 DSELQ8IZU8 1212 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 ZNF480Q8WV37 535 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 GFM2Q969S9 779 aaKnown RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 COX14Q96I36 57 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 RAB3IPQ96QF0 476 aaPredicted RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 XKR8Q9H6D3 395 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 POLR3HQ9Y535 204 aaPredicted RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 MGRN1O60291 552 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 PSIP1O75475 530 aaKnown RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 RSL1D1O76021 490 aaKnown RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 G6PDP11413 515 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 LBPP18428 481 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 AK4P27144 223 aaPredicted RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 TBL3Q12788 808 aaKnown RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 CAPRIN1Q14444 709 aaKnown RBP10.67□□□□□ -0.7
GGPS1-201ENST00000282841 AP5B1Q2VPB7 878 aa10.67□□□□□ -0.7
GGPS1-201ENST00000282841 ZNF658BQ4V348 819 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms