RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 VARSP26640 1264 aaKnown RBP17.46■□□□□ 0.39
CAPN1-201ENST00000279247 PFN3P60673 137 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 GTDC1Q4AE62 458 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 PARM1Q6UWI2 310 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 CYP2U1Q7Z449 544 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 FGF14Q92915 247 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 APIPQ96GX9 242 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 CCT7Q99832 543 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-201ENST00000279247 TRPS1Q9UHF7 1281 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 FCARP24071 287 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 FOLH1Q04609 750 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 NFE2L1Q14494 772 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 PDGFRLQ15198 375 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 CYP51A1Q16850 503 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 PGS1Q32NB8 556 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 TBCELQ5QJ74 424 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 AGTRAPQ6RW13 159 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-201ENST00000279247 OR2T34Q8NGX1 318 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 OR2T3Q8NH03 318 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 UBTD2Q8WUN7 234 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 TIFAQ96CG3 184 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 AURKBQ96GD4 344 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-201ENST00000279247 MYADMQ96S97 322 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 THUMPD3Q9BV44 507 aaKnown RBP17.46■□□□□ 0.39
CAPN1-201ENST00000279247 C1orf109Q9NX04 203 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 CNOT6Q9ULM6 557 aaKnown RBP17.46■□□□□ 0.39
CAPN1-201ENST00000279247 PCDHA9Q9Y5H5 950 aa17.46■□□□□ 0.39
CAPN1-201ENST00000279247 PCYT1BQ9Y5K3 369 aaPredicted RBP17.46■□□□□ 0.39
CAPN1-201ENST00000279247 SAC3D1A6NKF1 404 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 KPNA5O15131 536 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 AXIN1O15169 862 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 BCKDHAP12694 445 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 MED21Q13503 144 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 C6orf52Q5T4I8 152 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 OGFRL1Q5TC84 451 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-201ENST00000279247 LRRC70Q7Z2Q7 622 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 THOC6Q86W42 341 aaKnown RBP17.45■□□□□ 0.38
CAPN1-201ENST00000279247 GANCQ8TET4 914 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 MYOCQ99972 504 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 ATXN10Q9UBB4 475 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 GULP1Q9UBP9 304 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 PLAGL1Q9UM63 463 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 MYO15AQ9UKN7 3530 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 DPPA5A6NC42 116 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 SLCO2B1O94956 709 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 CATP04040 527 aaKnown RBP17.45■□□□□ 0.38
CAPN1-201ENST00000279247 TIE1P35590 1138 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 P2RY2P41231 377 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 OR4D2P58180 307 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 HYAL1Q12794 435 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 GK3PQ14409 553 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 IRGCQ6NXR0 463 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 ERN2Q76MJ5 926 aaKnown RBP17.45■□□□□ 0.38
CAPN1-201ENST00000279247 CXorf40AQ8TE69 158 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 CNBD2Q96M20 576 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 COQ10AQ96MF6 247 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 ACAT2Q9BWD1 397 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 PRSS16Q9NQE7 514 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 VAPAQ9P0L0 249 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 HCN2Q9UL51 889 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 PCDHGB4Q9UN71 923 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 PCDHGB5Q9Y5G0 923 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 ANKRD28O15084 1053 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 MID1O15344 667 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 MPC1LP0DKB6 136 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 PCNAP12004 261 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 GBX1Q14549 363 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 MAPKAPK3Q16644 382 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 C2orf27AQ580R0 203 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 PRMT9Q6P2P2 845 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 SYCE2Q6PIF2 218 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 PPP2R3CQ969Q6 453 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 FOPNLQ96NB1 174 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 PKP4Q99569 1192 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 STOX2Q9P2F5 926 aaPredicted RBP17.45■□□□□ 0.38
CAPN1-201ENST00000279247 ABCD2Q9UBJ2 740 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 SNX6Q9UNH7 406 aa17.45■□□□□ 0.38
CAPN1-201ENST00000279247 ARHGAP10A1A4S6 786 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 IGLON5A6NGN9 336 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 CD22P20273 847 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 SLC6A12P48065 614 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 PRLHRP49683 370 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 MEF2AQ02078 507 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-201ENST00000279247 ELP6Q0PNE2 266 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 CHRDL2Q6WN34 429 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 PHC3Q8NDX5 983 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 SLC13A3Q8WWT9 602 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 PPP1R16AQ96I34 528 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 OR52E6Q96RD3 313 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 TMEM245Q9H330 911 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 TM7SF3Q9NS93 570 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 AREL1O15033 823 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 AP2A2O94973 939 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 ENO2P09104 434 aaPredicted RBP17.44■□□□□ 0.38
CAPN1-201ENST00000279247 GSTM1P09488 218 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 UQCRBP14927 111 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 HNMTP50135 292 aa17.44■□□□□ 0.38
CAPN1-201ENST00000279247 GSTM4Q03013 218 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms