RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 PEX2P28328 305 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 STK19P49842 368 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 LMAN2Q12907 356 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 SLC10A2Q12908 348 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 ITGADQ13349 1161 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 HKDC1Q2TB90 917 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 SLC39A5Q6ZMH5 540 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 ZNF783Q6ZMS7 281 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 RELL1Q8IUW5 271 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 GJD3Q8N144 294 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 COX18Q8N8Q8 333 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 C2CD4AQ8NCU7 369 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 OR4F6Q8NGB9 312 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 BADQ92934 168 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 SCAMP4Q969E2 229 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 MS4A4AQ96JQ5 239 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 ZNF641Q96N77 438 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 PCDHAC1Q9H158 963 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 IL23AQ9NPF7 189 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 RGPD1P0DJD0 1748 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 ERI3O43414 337 aaKnown RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 CSNK2A2P19784 350 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 PAX7P23759 505 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 DNAJB1P25685 340 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 ALDH4A1P30038 563 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 OLR1P78380 273 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 SCAPQ12770 1279 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 SEMA3AQ14563 771 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 NDUFAF6Q330K2 333 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 EOGTQ5NDL2 527 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 C6orf52Q5T4I8 152 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 ZNF354BQ96LW1 612 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 ZNF317Q96PQ6 595 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 MRM3Q9HC36 420 aaKnown RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 NLE1Q9NVX2 485 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 CMTM6Q9NX76 183 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 SLC7A8Q9UHI5 535 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 NUP98P52948 1817 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 A0A0J9YVX5 310 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 LIN7AO14910 233 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 LEFTY1O75610 366 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 ANGPTL1O95841 491 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 MPIP34949 423 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 RCVRNP35243 200 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 TGFBIQ15582 683 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 FBXO46Q6PJ61 603 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 FAM43BQ6ZT52 329 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 ANKHQ9HCJ1 492 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 DZANK1Q9NVP4 752 aa11.03□□□□□ -0.64
USP6NL-201ENST00000277575 RSL24D1Q9UHA3 163 aaKnown RBP11.03□□□□□ -0.64
USP6NL-201ENST00000277575 B4DGG1 531 aa11.02□□□□□ -0.64
USP6NL-201ENST00000277575 SERPINA1P01009 418 aa11.02□□□□□ -0.64
USP6NL-201ENST00000277575 CFIP05156 583 aa11.02□□□□□ -0.64
USP6NL-201ENST00000277575 HNRNPA1P09651 372 aaKnown RBP eCLIP11.02□□□□□ -0.64
USP6NL-201ENST00000277575 MYCLP1P12525 358 aaPredicted RBP11.02□□□□□ -0.64
USP6NL-201ENST00000277575 DGKQP52824 942 aa11.02□□□□□ -0.64
USP6NL-201ENST00000277575 SLC5A9Q2M3M2 681 aa11.02□□□□□ -0.64
USP6NL-201ENST00000277575 PIK3R6Q5UE93 754 aa11.02□□□□□ -0.64
USP6NL-201ENST00000277575 THOC6Q86W42 341 aaKnown RBP11.02□□□□□ -0.64
USP6NL-201ENST00000277575 GIPC3Q8TF64 312 aa11.02□□□□□ -0.64
USP6NL-201ENST00000277575 C1GALT1C1Q96EU7 318 aa11.02□□□□□ -0.64
USP6NL-201ENST00000277575 SGIP1Q9BQI5 828 aa11.02□□□□□ -0.64
USP6NL-201ENST00000277575 NECTIN3Q9NQS3 549 aa11.02□□□□□ -0.64
USP6NL-201ENST00000277575 ARHGEF3Q9NR81 526 aa11.02□□□□□ -0.64
USP6NL-201ENST00000277575 CITO14578 2027 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 TP73O15350 636 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 GRID2O43424 1007 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 NUP62P37198 522 aaPredicted RBP11.02□□□□□ -0.65
USP6NL-201ENST00000277575 BDKRB1P46663 353 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 MYBPC1Q00872 1141 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 BNC1Q01954 994 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 HERC3Q15034 1050 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 ANO7Q6IWH7 933 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 MRPL10Q7Z7H8 261 aaKnown RBP11.02□□□□□ -0.65
USP6NL-201ENST00000277575 KCT2Q8NC54 265 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 OR10H5Q8NGA6 315 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 GPR151Q8TDV0 419 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 RGMAQ96B86 450 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 SLC29A3Q9BZD2 475 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 DNAAF2Q9NVR5 837 aaKnown RBP11.02□□□□□ -0.65
USP6NL-201ENST00000277575 SLCO3A1Q9UIG8 710 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 TMEM98Q9Y2Y6 226 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 WASF2Q9Y6W5 498 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 CHD4Q14839 1912 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 TMEM150CB9EJG8 249 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 CLIC1O00299 241 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 KMOO15229 486 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 MGRN1O60291 552 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 TMCC2O75069 709 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 NME6O75414 186 aaPredicted RBP11.02□□□□□ -0.65
USP6NL-201ENST00000277575 RFPL2O75678 378 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 PAK4O96013 591 aaPredicted RBP11.02□□□□□ -0.65
USP6NL-201ENST00000277575 MYL9P24844 172 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 PGDP52209 483 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 CASP9P55211 416 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 TMEM115Q12893 351 aaPredicted RBP11.02□□□□□ -0.65
USP6NL-201ENST00000277575 CCDC88AQ3V6T2 1871 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 ACSBG2Q5FVE4 666 aa11.02□□□□□ -0.65
USP6NL-201ENST00000277575 DDI2Q5TDH0 399 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms